#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 14:15:165:166:177:179
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  6
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  6
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = UGAAGU
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = ACACA
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  14
S3_NAME_ID3 = 18
S3_NUM_ID5_ORIG =  14
S3_NUM_ID3_ORIG = 18
S3_NAME2_ID5 =  15
S3_NAME2_ID3 = 17
S3_NUM2_ID5_ORIG =  15
S3_NUM2_ID3_ORIG = 17
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = ACACA
S3_SQLEN = 5
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  6
S4_NAME_ID3 = 11
S4_NUM_ID5_ORIG =  6
S4_NUM_ID3_ORIG = 11
S4_NAME2_ID5 =  7
S4_NAME2_ID3 = 10
S4_NUM2_ID5_ORIG =  7
S4_NUM2_ID3_ORIG = 10
S4_SQ2 = GAAG
S4_SQLEN2 = 4
S4_SQ = UGAAGU
S4_SQLEN = 6
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 24.795868478806174
H1_P_Y = 73.80690650289311
H1_P_Z = 56.611308648094145
# Orientation:
H1_DX_X = -0.5608527245368755
H1_DX_Y = 0.05939128556562423
H1_DX_Z = 0.825782596437115
H1_DY_X = 0.8100943622056178
H1_DY_Y = -0.16646843532693367
H1_DY_Z = 0.5621702449992156
H1_DZ_X = 0.17085475030634356
H1_DZ_Y = 0.9842565393425957
H1_DZ_Z = 0.045251729901650606
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 17.395819388062534
H2_P_Y = 55.60337266179538
H2_P_Z = 57.98834912849623
# Orientation:
H2_DX_X = 0.8937225752989555
H2_DX_Y = -0.39842193283480043
H2_DX_Z = 0.20620359317234005
H2_DY_X = 0.19333819994341894
H2_DY_Y = -0.07270199239286512
H2_DY_Z = -0.9784348525807687
H2_DZ_X = 0.4048213171803603
H2_DZ_Y = 0.9143163477365448
H2_DZ_Z = 0.012054767441540548
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 7
H3_OUTID2_ORIG = 17
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 12.046047322943567
H3_P_Y = 41.08487921802628
H3_P_Z = 56.501001077208834
# Orientation:
H3_DX_X = 0.37192171972434984
H3_DX_Y = -0.05093714846287867
H3_DX_Z = 0.9268654925628397
H3_DY_X = -0.9133366506421616
H3_DY_Y = 0.15826583004615458
H3_DY_Z = 0.3751907376702732
H3_DZ_X = -0.1658022828282011
H3_DZ_Y = -0.9860818089521146
H3_DZ_Z = 0.012339735114018424
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 15
H4_OUTID2_ORIG = 10
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 19.20301533080531
H4_P_Y = 58.98128650486857
H4_P_Z = 58.20783548623096
# Orientation:
H4_DX_X = -0.9072252368445177
H4_DX_Y = 0.4201268941091456
H4_DX_Z = -0.020874924637091397
H4_DY_X = 0.027448483159808745
H4_DY_Y = 0.00960629011016323
H4_DY_Z = -0.9995770605423786
H4_DZ_X = -0.419748675286332
H4_DZ_Y = -0.9074145205122761
H4_DZ_Z = -0.020246914798327964
#############  END of Description of junction: j1