############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 152 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 177 S1_NAME_ID3 = 185 S1_NUM_ID5_ORIG = 177 S1_NUM_ID3_ORIG = 185 S1_NAME2_ID5 = 179 S1_NAME2_ID3 = 183 S1_NUM2_ID5_ORIG = 179 S1_NUM2_ID3_ORIG = 183 S1_SQ2 = UCAGU S1_SQLEN2 = 5 S1_SQ = UCUCAGUAC S1_SQLEN = 9 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 165 S2_NAME_ID3 = 172 S2_NUM_ID5_ORIG = 165 S2_NUM_ID3_ORIG = 172 S2_NAME2_ID5 = 167 S2_NAME2_ID3 = 170 S2_NUM2_ID5_ORIG = 167 S2_NUM2_ID3_ORIG = 170 S2_SQ2 = AACU S2_SQLEN2 = 4 S2_SQ = GGAACUGA S2_SQLEN = 8 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 179 H1_OUTID2_ORIG = 170 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 44.905574016793054 H1_P_Y = 150.84029512508698 H1_P_Z = 90.3869847167878 # Orientation: H1_DX_X = -0.5539285983710442 H1_DX_Y = -0.3805132183402975 H1_DX_Z = -0.7405219771046774 H1_DY_X = 0.2831611724976497 H1_DY_Y = 0.7503206709239691 H1_DY_Z = -0.5973597251020095 H1_DZ_X = 0.7829322182005569 H1_DZ_Y = -0.5405817065463054 H1_DZ_Z = -0.3078775085176346 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 167 H2_OUTID2_ORIG = 183 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 23.274518827270533 H2_P_Y = 165.87740178936173 H2_P_Z = 96.94582902437303 # Orientation: H2_DX_X = 0.27213864744120286 H2_DX_Y = -0.7741510040492869 H2_DX_Z = 0.5715162110547425 H2_DY_X = 0.5212563679394719 H2_DY_Y = 0.6178422512749648 H2_DY_Z = 0.5886958055074274 H2_DZ_X = -0.8088463113913775 H2_DZ_Y = 0.13769958412783012 H2_DZ_Z = 0.5716698952014099 ############# END of Description of junction: j4