############# Start of Description of junction: j12 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS8HS2HS4 FINGERPRINT = 66:79:81:86:94:111:112:114:143:160 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 679 S1_NAME_ID3 = 686 S1_NUM_ID5_ORIG = 679 S1_NUM_ID3_ORIG = 686 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = CUAGACUC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 591 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 591 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GGCGACUUAG S2_SQLEN = 10 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 820 S3_NAME_ID3 = 827 S3_NUM_ID5_ORIG = 820 S3_NUM_ID3_ORIG = 827 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = UAGUUCUC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1207 S4_NAME_ID3 = 1214 S4_NUM_ID5_ORIG = 1207 S4_NUM_ID3_ORIG = 1214 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1212 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1212 S4_SQ2 = GCGU S4_SQLEN2 = 4 S4_SQ = GAGCGUUC S4_SQLEN = 8 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1258 S5_NAME_ID3 = 1271 S5_NUM_ID5_ORIG = 1258 S5_NUM_ID3_ORIG = 1271 S5_NAME2_ID5 = 1260 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1260 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = AGUGCGGAUG S5_SQLEN2 = 10 S5_SQ = GAAGUGCGGAUGCC S5_SQLEN = 14 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 18.696684366622154 H1_P_Y = 138.2064139288717 H1_P_Z = 76.28871638116732 # Orientation: H1_DX_X = -0.3097933801994408 H1_DX_Y = 0.9166834460185669 H1_DX_Z = 0.2524272595821202 H1_DY_X = 0.8511882644096822 H1_DY_Y = 0.38568656177523053 H1_DY_Z = -0.3559837279949818 H1_DZ_X = -0.42368219235154925 H1_DZ_Y = 0.10458171858184073 H1_DZ_Z = -0.89975333509949 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 32.31110031781397 H2_P_Y = 133.53492655908875 H2_P_Z = 93.49348229140804 # Orientation: H2_DX_X = -0.7515678681132663 H2_DX_Y = -0.1361929727248139 H2_DX_Z = 0.6454434241667286 H2_DY_X = 0.6211417023159882 H2_DY_Y = -0.4755474062238818 H2_DY_Z = 0.6229266811413083 H2_DZ_X = 0.2221007097324943 H2_DZ_Y = 0.869083504971826 H2_DZ_Z = 0.44200128520424187 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 19.71274138299179 H3_P_Y = 114.70662113929522 H3_P_Z = 79.36140194451367 # Orientation: H3_DX_X = -0.6006714710545928 H3_DX_Y = -0.7770376506212955 H3_DX_Z = 0.18816554779785122 H3_DY_X = -0.14425405185383156 H3_DY_Y = -0.12615702939025653 H3_DY_Z = -0.98146582847248 H3_DZ_X = 0.7863743080651062 H3_DZ_Y = -0.6166821656675125 H3_DZ_Z = -0.03631190111738647 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 3 H4_OUTID2 = 6 H4_INID2_ORIG = 1260 H4_OUTID2_ORIG = 1212 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = -2.961643736989071 H4_P_Y = 123.78035036914142 H4_P_Z = 84.563604995868 # Orientation: H4_DX_X = 0.1991847053988507 H4_DX_Y = 0.7263157308874924 H4_DX_Z = 0.6578684611687464 H4_DY_X = -0.14579777337599698 H4_DY_Y = 0.6858130460454674 H4_DY_Z = -0.7130241757138691 H4_DZ_X = -0.9690554485754563 H4_DZ_Y = 0.04610775356913166 H4_DZ_Z = 0.2424986858666074 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 18.602497202984946 H5_P_Y = 119.65987159417517 H5_P_Z = 111.00305782098503 # Orientation: H5_DX_X = -0.31291569010114983 H5_DX_Y = 0.9456063829819215 H5_DX_Z = 0.08895133136927313 H5_DY_X = -0.946107534563204 H5_DY_Y = -0.31856438467596604 H5_DY_Z = 0.05828606916549006 H5_DZ_X = 0.08345240518557162 H5_DZ_Y = -0.06591889926170325 H5_DZ_Z = 0.9943291179427831 ############# END of Description of junction: j12