############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.83287113200689 H1_P_Y = 129.15680281117582 H1_P_Z = 14.207793563628996 # Orientation: H1_DX_X = 0.1336986374813165 H1_DX_Y = -0.7765011794678855 H1_DX_Z = 0.6157682945886478 H1_DY_X = 0.6202746224458835 H1_DY_Y = 0.5501606050803787 H1_DY_Z = 0.5590909598332132 H1_DZ_X = -0.7729062472805168 H1_DZ_Y = 0.3071957468822859 H1_DZ_Z = 0.5551996992183756 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.85383505681259 H2_P_Y = 119.75654403500599 H2_P_Z = 1.0852995758773112 # Orientation: H2_DX_X = -0.9455048609051957 H2_DX_Y = -0.32518945789351505 H2_DX_Z = 0.01650377167716055 H2_DY_X = -0.22305567321919284 H2_DY_Y = 0.6099546682426933 H2_DY_Z = -0.7603956005486127 H2_DZ_X = 0.23720608054891557 H2_DZ_Y = -0.7226389964317406 H2_DZ_Z = -0.6492504572094996 ############# END of Description of junction: j4