############# Start of Description of junction: j42 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS16HS3 FINGERPRINT = 66:132:161 LOOP_LENGTH_SUM = 20 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2362 S1_NAME_ID3 = 2383 S1_NUM_ID5_ORIG = 2362 S1_NUM_ID3_ORIG = 2383 S1_NAME2_ID5 = 2364 S1_NAME2_ID3 = 2381 S1_NUM2_ID5_ORIG = 2364 S1_NUM2_ID3_ORIG = 2381 S1_SQ2 = AGCAAAAGAUGACUUGAC S1_SQLEN2 = 18 S1_SQ = AGAGCAAAAGAUGACUUGACAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2416 S2_NAME_ID3 = 2424 S2_NUM_ID5_ORIG = 2416 S2_NUM_ID3_ORIG = 2424 S2_NAME2_ID5 = 2418 S2_NAME2_ID3 = 2422 S2_NUM2_ID5_ORIG = 2418 S2_NUM2_ID3_ORIG = 2422 S2_SQ2 = GUGGU S2_SQLEN2 = 5 S2_SQ = GCGUGGUCU S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2405 S3_NAME_ID3 = 2411 S3_NUM_ID5_ORIG = 2405 S3_NUM_ID3_ORIG = 2411 S3_NAME2_ID5 = 2407 S3_NAME2_ID3 = 2409 S3_NUM2_ID5_ORIG = 2407 S3_NUM2_ID3_ORIG = 2409 S3_SQ2 = GAC S3_SQLEN2 = 3 S3_SQ = CUGACGC S3_SQLEN = 7 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 2364 H1_OUTID2_ORIG = 2422 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 76.79690408628136 H1_P_Y = 63.51153580639734 H1_P_Z = 90.30689265851566 # Orientation: H1_DX_X = -0.9603913523349661 H1_DX_Y = -0.022958872326320545 H1_DX_Z = -0.2777072929214057 H1_DY_X = -0.21530006330520735 H1_DY_Y = 0.6938225646209943 H1_DY_Z = 0.6872089431632418 H1_DZ_X = 0.17690204380109265 H1_DZ_Y = 0.7197799240075042 H1_DZ_Z = -0.6712842377821318 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 2407 H2_OUTID2_ORIG = 2381 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 66.08467218963352 H2_P_Y = 55.56188069710036 H2_P_Z = 70.30692403693155 # Orientation: H2_DX_X = 0.3474944010925469 H2_DX_Y = 0.3847473450059766 H2_DX_Z = -0.8551123445022739 H2_DY_X = -0.8065710939792865 H2_DY_Y = -0.34244274776465744 H2_DY_Z = -0.4818464847443238 H2_DZ_X = -0.4782161766046755 H2_DZ_Y = 0.8571478548151674 H2_DZ_Z = 0.19132914942413493 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 2418 H3_OUTID2_ORIG = 2409 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 71.5654355994227 H3_P_Y = 35.476175251252954 H3_P_Z = 70.59671756951931 # Orientation: H3_DX_X = 0.8319221026443415 H3_DX_Y = 0.32518605208138496 H3_DX_Z = 0.44962167058933744 H3_DY_X = -0.4497742169563139 H3_DY_Y = -0.07937054705382707 H3_DY_Z = 0.8896086049615946 H3_DZ_X = 0.3249750281070334 H3_DZ_Y = -0.9423132959860538 H3_DZ_Z = 0.08023018954696681 ############# END of Description of junction: j42