############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 24:47:63:148:148:155 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 115.30145236681746 H1_P_Y = 113.56454793576916 H1_P_Z = 88.56629230293638 # Orientation: H1_DX_X = 0.7135899759780671 H1_DX_Y = -0.497550231855314 H1_DX_Z = 0.4931866917956711 H1_DY_X = -0.5636252151411014 H1_DY_Y = -0.8258422274725916 H1_DY_Z = -0.017641773726808196 H1_DZ_X = 0.4160720647204812 H1_DZ_Y = -0.26538346237815347 H1_DZ_Z = -0.8697445917368043 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.69182688255113 H2_P_Y = 99.28933363970435 H2_P_Z = 103.71355555083595 # Orientation: H2_DX_X = -0.9848706847667188 H2_DX_Y = -0.14826310606503057 H2_DX_Z = 0.08970945138102593 H2_DY_X = 0.15397396065287694 H2_DY_Y = -0.9862233602054715 H2_DY_Z = 0.06046075773491566 H2_DZ_X = 0.079509456846381 H2_DZ_Y = 0.0733589474090337 H2_DZ_Z = 0.9941311337580316 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.2934716025291 H3_P_Y = 112.90188181774543 H3_P_Z = 105.45674952202556 # Orientation: H3_DX_X = 0.8746549891127557 H3_DX_Y = 0.44265046345691417 H3_DX_Z = -0.19758344369289205 H3_DY_X = -0.4836437701624021 H3_DY_Y = 0.7694124938966951 H3_DY_Z = -0.4172446738051576 H3_DZ_X = -0.03267037807033546 H3_DZ_Y = 0.4605051372537048 H3_DZ_Z = 0.8870556154828648 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.49354017780607 H4_P_Y = 129.38902648179234 H4_P_Z = 93.07386815092028 # Orientation: H4_DX_X = -0.29664088991241044 H4_DX_Y = -0.8330978525684998 H4_DX_Z = 0.46685345717659743 H4_DY_X = 0.6426487757241119 H4_DY_Y = 0.18746495948980169 H4_DY_Z = 0.7428724251335268 H4_DZ_X = -0.7064040865483747 H4_DZ_Y = 0.5203891399800966 H4_DZ_Z = 0.47977954260107936 ############# END of Description of junction: j55