#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 10:75:78:78:85:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.60536390199273
H1_P_Y = 127.13832925001864
H1_P_Z = 36.902805658981045
# Orientation:
H1_DX_X = -0.19323568162800342
H1_DX_Y = -0.9339965640092345
H1_DX_Z = 0.3005168710151054
H1_DY_X = -0.5766776354035414
H1_DY_Y = -0.13968350921737738
H1_DY_Z = -0.8049418749686765
H1_DZ_X = 0.7937901965703134
H1_DZ_Y = -0.32884485045636325
H1_DZ_Z = -0.5116230918920692
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.717070425188204
H2_P_Y = 144.0033541550443
H2_P_Z = 55.98276502756234
# Orientation:
H2_DX_X = -0.6397864141771805
H2_DX_Y = 0.4239637116907602
H2_DX_Z = 0.6410367504314536
H2_DY_X = 0.2360240564310203
H2_DY_Y = -0.6853913869011024
H2_DY_Z = 0.6888623168294501
H2_DZ_X = 0.7314136921196805
H2_DZ_Y = 0.5920248457042874
H2_DZ_Z = 0.33843846272058187
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.511296871717363
H3_P_Y = 171.54099915527726
H3_P_Z = 66.04710262193514
# Orientation:
H3_DX_X = -0.7131476937377457
H3_DX_Y = 0.6851657765446078
H3_DX_Z = -0.1482168194523581
H3_DY_X = -0.33710152645365454
H3_DY_Y = -0.14980244164041778
H3_DY_Z = 0.9294739315016898
H3_DZ_X = 0.614640486609165
H3_DZ_Y = 0.7128163067232833
H3_DZ_Z = 0.33780169491913625
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.88313207679456
H4_P_Y = 141.47931348747468
H4_P_Z = 69.24092929538205
# Orientation:
H4_DX_X = -0.7708259957549934
H4_DX_Y = -0.6248738151217026
H4_DX_Z = -0.12393546483379225
H4_DY_X = 0.579004182495467
H4_DY_Y = -0.7683428629208038
H4_DY_Z = 0.2727698693979903
H4_DZ_X = -0.26567167880878273
H4_DZ_Y = 0.13849895369236265
H4_DZ_Z = 0.9540632048795459
#############  END of Description of junction: j1