#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS6HS8
FINGERPRINT = 53:75:117:133:143:148
LOOP_LENGTH_SUM = 15
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  479
S1_NAME_ID3 = 490
S1_NUM_ID5_ORIG =  479
S1_NUM_ID3_ORIG = 490
S1_NAME2_ID5 =  480
S1_NAME2_ID3 = 489
S1_NUM2_ID5_ORIG =  480
S1_NUM2_ID3_ORIG = 489
S1_SQ2 = CUGCAAAGUA
S1_SQLEN2 = 10
S1_SQ = GCUGCAAAGUAC
S1_SQLEN = 12
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  26
S2_NAME_ID3 = 29
S2_NUM_ID5_ORIG =  26
S2_NUM_ID3_ORIG = 29
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 28
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 28
S2_SQ2 = UG
S2_SQLEN2 = 2
S2_SQ = UUGC
S2_SQLEN = 4
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  502
S3_NAME_ID3 = 506
S3_NUM_ID5_ORIG =  502
S3_NUM_ID3_ORIG = 506
S3_NAME2_ID5 =  503
S3_NAME2_ID3 = 505
S3_NUM2_ID5_ORIG =  503
S3_NUM2_ID3_ORIG = 505
S3_SQ2 = GGC
S3_SQLEN2 = 3
S3_SQ = AGGCG
S3_SQLEN = 5
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  508
S4_NAME_ID3 = 517
S4_NUM_ID5_ORIG =  508
S4_NUM_ID3_ORIG = 517
S4_NAME2_ID5 =  509
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  509
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = AUAGAGCA
S4_SQLEN2 = 8
S4_SQ = AAUAGAGCAU
S4_SQLEN = 10
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 480
H1_OUTID2_ORIG = 28
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 33.427553887012465
H1_P_Y = 134.31661233653833
H1_P_Z = 56.88833890208998
# Orientation:
H1_DX_X = -0.7572210917969642
H1_DX_Y = 0.16843600447916174
H1_DX_Z = -0.6310669778501463
H1_DY_X = 0.5277029077651392
H1_DY_Y = 0.7271192964654745
H1_DY_Z = -0.4391209057238967
H1_DZ_X = 0.38489720611357825
H1_DZ_Y = -0.6655274908692093
H1_DZ_Z = -0.6394742368722248
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 2
H2_OUTID2 = 11
H2_INID2_ORIG = 503
H2_OUTID2_ORIG = 489
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 23.875492516909922
H2_P_Y = 169.73523980129846
H2_P_Z = 65.23736853684835
# Orientation:
H2_DX_X = -0.41551274475732214
H2_DX_Y = 0.678369318712214
H2_DX_Z = -0.6059407779430046
H2_DY_X = -0.6675970543592022
H2_DY_Y = 0.22501657458337831
H2_DY_Z = 0.7097053713856809
H2_DZ_X = 0.6177890675264095
H2_DZ_Y = 0.6994159053043632
H2_DZ_Z = 0.35938010441890356
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 509
H3_OUTID2_ORIG = 505
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 7.909331679010002
H3_P_Y = 157.34446607683992
H3_P_Z = 57.532073115150794
# Orientation:
H3_DX_X = 0.8171385316442707
H3_DX_Y = 0.156572921243594
H3_DX_Z = -0.5547698085111463
H3_DY_X = 0.3489274679948968
H3_DY_Y = -0.9004119240546515
H3_DY_Z = 0.25982299570834755
H3_DZ_X = -0.45884010524463115
H3_DZ_Y = -0.4058858058043313
H3_DZ_Z = -0.790393870463113
## Properties of helix 4
H4_INID = 1
H4_OUTID = 10
H4_INID2 = 2
H4_OUTID2 = 9
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 28.55789849768786
H4_P_Y = 141.7102489105783
H4_P_Z = 66.59916667511649
# Orientation:
H4_DX_X = -0.9589313548718756
H4_DX_Y = -0.13788070253471574
H4_DX_Z = -0.24787006376752174
H4_DY_X = 0.10086592644184478
H4_DY_Y = -0.9825408380471288
H4_DY_Z = 0.15633159134561936
H4_DZ_X = -0.26509756982404653
H4_DZ_Y = 0.12490962107921177
H4_DZ_Z = 0.9560966818451107
#############  END of Description of junction: j9