############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS4HS5 FINGERPRINT = 55:122:174 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 321 S1_NAME_ID3 = 325 S1_NUM_ID5_ORIG = 321 S1_NUM_ID3_ORIG = 325 S1_NAME2_ID5 = 322 S1_NAME2_ID3 = 324 S1_NUM2_ID5_ORIG = 322 S1_NUM2_ID3_ORIG = 324 S1_SQ2 = GCG S1_SQLEN2 = 3 S1_SQ = AGCGU S1_SQLEN = 5 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 303 S2_NAME_ID3 = 310 S2_NUM_ID5_ORIG = 303 S2_NUM_ID3_ORIG = 310 S2_NAME2_ID5 = 304 S2_NAME2_ID3 = 309 S2_NUM2_ID5_ORIG = 304 S2_NUM2_ID3_ORIG = 309 S2_SQ2 = GAAGUC S2_SQLEN2 = 6 S2_SQ = CGAAGUCU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 340 S3_NAME_ID3 = 348 S3_NUM_ID5_ORIG = 340 S3_NUM_ID3_ORIG = 348 S3_NAME2_ID5 = 341 S3_NAME2_ID3 = 347 S3_NUM2_ID5_ORIG = 341 S3_NUM2_ID3_ORIG = 347 S3_SQ2 = CCCCGUA S3_SQLEN2 = 7 S3_SQ = ACCCCGUAC S3_SQLEN = 9 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 322 H1_OUTID2_ORIG = 309 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 4.200640925099405 H1_P_Y = 140.5646592611537 H1_P_Z = 39.798782654797265 # Orientation: H1_DX_X = -0.7584999386737499 H1_DX_Y = 0.4906318798556981 H1_DX_Z = -0.4289034873968447 H1_DY_X = -0.6393875067935726 H1_DY_Y = -0.43309841184876063 H1_DY_Z = 0.6353025907474077 H1_DZ_X = 0.12594228514762484 H1_DZ_Y = 0.7561125075829409 H1_DZ_Z = 0.64220901324137 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 5 H2_INID2 = 2 H2_OUTID2 = 4 H2_INID2_ORIG = 341 H2_OUTID2_ORIG = 324 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 5.998844518992051 H2_P_Y = 128.01383774392548 H2_P_Z = 31.245795284736534 # Orientation: H2_DX_X = -0.2706343668964646 H2_DX_Y = 0.5805507469541453 H2_DX_Z = -0.7679309016217069 H2_DY_X = 0.9615437824418773 H2_DY_Y = 0.1242319015778719 H2_DY_Z = -0.24494895198328592 H2_DZ_X = -0.046803780850648735 H2_DZ_Y = -0.8046907883412757 H2_DZ_Z = -0.5918463831576233 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 2 H3_OUTID2 = 8 H3_INID2_ORIG = 304 H3_OUTID2_ORIG = 347 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 30.983243023157215 H3_P_Y = 133.13425637815763 H3_P_Z = 21.412149452610635 # Orientation: H3_DX_X = -0.5986443749388037 H3_DX_Y = -0.7193538820459366 H3_DX_Z = -0.35235621853399834 H3_DY_X = -0.27905815061537353 H3_DY_Y = 0.5996241333643013 H3_DY_Z = -0.750051629731086 H3_DZ_X = 0.7508338437559026 H3_DZ_Y = -0.35068631435026987 H3_DZ_Z = -0.5597031784778039 ############# END of Description of junction: j9