############# Start of Description of junction: j54 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS12HS1HS2 FINGERPRINT = 19:22:44:61:128:147:149:158:164:169 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1967 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1967 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1966 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1966 S3_SQ2 = CU S3_SQLEN2 = 2 S3_SQ = UCUU S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1969 S4_NAME_ID3 = 1973 S4_NUM_ID5_ORIG = 1969 S4_NUM_ID3_ORIG = 1973 S4_NAME2_ID5 = 1970 S4_NAME2_ID3 = 1972 S4_NUM2_ID5_ORIG = 1970 S4_NUM2_ID3_ORIG = 1972 S4_SQ2 = GGU S4_SQLEN2 = 3 S4_SQ = AGGUA S4_SQLEN = 5 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2009 S5_NAME_ID3 = 2014 S5_NUM_ID5_ORIG = 2009 S5_NUM_ID3_ORIG = 2014 S5_NAME2_ID5 = 2010 S5_NAME2_ID3 = 2013 S5_NUM2_ID5_ORIG = 2010 S5_NUM2_ID3_ORIG = 2013 S5_SQ2 = AAUG S5_SQLEN2 = 4 S5_SQ = GAAUGG S5_SQLEN = 6 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 115.30681534406507 H1_P_Y = 113.65859879098443 H1_P_Z = 88.65159934908141 # Orientation: H1_DX_X = 0.7126935272293764 H1_DX_Y = -0.5242204856205319 H1_DX_Z = 0.46611245284923086 H1_DY_X = -0.578463935440169 H1_DY_Y = -0.8150720681281456 H1_DY_Z = -0.03220247121542741 H1_DZ_X = 0.3967964360228393 H1_DZ_Y = -0.2466787510368107 H1_DZ_Z = -0.8841392323307957 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.90904823159421 H2_P_Y = 99.58125533026957 H2_P_Z = 102.68558817326661 # Orientation: H2_DX_X = -0.9707563249924789 H2_DX_Y = -0.16491474976962195 H2_DX_Z = 0.17445710875603027 H2_DY_X = 0.1870793241793649 H2_DY_Y = -0.9750803724327426 H2_DY_Z = 0.11924593813213846 H2_DZ_X = 0.15044428853126135 H2_DZ_Y = 0.14839606667581506 H2_DZ_Z = 0.977417578849213 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 1970 H3_OUTID2_ORIG = 1966 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 118.50996740103471 H3_P_Y = 92.94665206704971 H3_P_Z = 91.0664099028552 # Orientation: H3_DX_X = -0.954748871089464 H3_DX_Y = 0.28749371097305243 H3_DX_Z = -0.07617059343566268 H3_DY_X = 0.2950050126409991 H3_DY_Y = 0.9479583459542056 H3_DY_Z = -0.11977903344266849 H3_DZ_X = 0.03777083094240652 H3_DZ_Y = -0.13682960383893317 H3_DZ_Z = -0.9898742464794168 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 2010 H4_OUTID2_ORIG = 1972 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 113.62992781090352 H4_P_Y = 112.57822226836103 H4_P_Z = 105.03201161844923 # Orientation: H4_DX_X = 0.8667191218127357 H4_DX_Y = 0.4714199962827621 H4_DX_Z = -0.16297592150044693 H4_DY_X = -0.4965923174681137 H4_DY_Y = 0.7848462355382537 H4_DY_Z = -0.37069186232376694 H4_DZ_X = -0.04684051788571253 H4_DZ_Y = 0.4022183159258077 H4_DZ_Z = 0.9143447884786156 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 6 H5_INID2 = 2 H5_OUTID2 = 5 H5_INID2_ORIG = 1889 H5_OUTID2_ORIG = 2013 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 114.41633281135321 H5_P_Y = 129.37929108323198 H5_P_Z = 92.75361033819487 # Orientation: H5_DX_X = -0.28294438365644226 H5_DX_Y = -0.8365983636380179 H5_DX_Z = 0.4690902404820321 H5_DY_X = 0.6796994948117288 H5_DY_Y = 0.17017468041856887 H5_DY_Z = 0.7134768215556306 H5_DZ_X = -0.67672082316858 H5_DZ_Y = 0.520714659004966 H5_DZ_Z = 0.520485515060102 ############# END of Description of junction: j54