############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.91734534331585 H1_P_Y = 129.30464213412728 H1_P_Z = 14.269970227835516 # Orientation: H1_DX_X = 0.13213862174438873 H1_DX_Y = -0.7788979710220758 H1_DX_Z = 0.6130720474636 H1_DY_X = 0.6140887388347309 H1_DY_Y = 0.549833288245452 H1_DY_Z = 0.5661964111274038 H1_DZ_X = -0.778096655615407 H1_DZ_Y = 0.3016642270387706 H1_DZ_Z = 0.5509666856037985 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.87180626090388 H2_P_Y = 119.89918561430521 H2_P_Z = 1.1057132049697893 # Orientation: H2_DX_X = -0.9382110999556517 H2_DX_Y = -0.34551847897954246 H2_DX_Z = 0.01941423713874868 H2_DY_X = -0.23760111404460815 H2_DY_Y = 0.6023570493931913 H2_DY_Z = -0.7620444184239457 H2_DZ_X = 0.25160612576956964 H2_DZ_Y = -0.7195713763970844 H2_DZ_Z = -0.6472336454057621 ############# END of Description of junction: j4