############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 63:129:168 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCU S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = AGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 55.07778913032919 H1_P_Y = 156.05395939543143 H1_P_Z = 42.609093936945214 # Orientation: H1_DX_X = 0.15534581041529805 H1_DX_Y = 0.84314616700118 H1_DX_Z = -0.51475452427119 H1_DY_X = -0.7354854536209388 H1_DY_Y = -0.2491555375936798 H1_DY_Z = -0.6300656042019952 H1_DZ_X = -0.6594913393657436 H1_DZ_Y = 0.4764725166865844 H1_DZ_Z = 0.5814164721986472 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.60909459126714 H2_P_Y = 153.35205720544243 H2_P_Z = 20.915483413573305 # Orientation: H2_DX_X = 0.41933978531479 H2_DX_Y = 0.7812357354489734 H2_DX_Z = -0.4624120133707734 H2_DY_X = 0.2109582411114772 H2_DY_Y = -0.579273185277458 H2_DY_Z = -0.7873621767177177 H2_DZ_X = -0.8829783490886385 H2_DZ_Y = 0.23262266114028307 H2_DZ_Z = -0.4077204097966174 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.36069597081533 H3_P_Y = 148.89385074011852 H3_P_Z = 31.710410025942988 # Orientation: H3_DX_X = 0.6021155548765478 H3_DX_Y = 0.4427682596386262 H3_DX_Z = 0.6643892886194571 H3_DY_X = -0.1160923135477816 H3_DY_Y = -0.7747456035147593 H3_DY_Z = 0.621523792440545 H3_DZ_X = 0.7899236882831246 H3_DZ_Y = -0.45135963276652546 H3_DZ_Z = -0.41508438732148534 ############# END of Description of junction: j1