############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 62:63:111:113:125:171 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 222.08291669153448 H1_P_Y = 149.7858877580928 H1_P_Z = 46.21925709725838 # Orientation: H1_DX_X = -0.652471644761988 H1_DX_Y = 0.21604159100820652 H1_DX_Z = 0.7263654615524118 H1_DY_X = 0.26430174679344987 H1_DY_Y = 0.9631911032719813 H1_DY_Z = -0.049066131084892106 H1_DZ_X = -0.7102290753155103 H1_DZ_Y = 0.159965401047657 H1_DZ_Z = -0.6855550532554773 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 237.47835408540013 H2_P_Y = 147.66527310826365 H2_P_Z = 59.570944569742096 # Orientation: H2_DX_X = 0.05504673257081549 H2_DX_Y = 0.010501816438676315 H2_DX_Z = 0.9984285498145482 H2_DY_X = 0.6631951322508769 H2_DY_Y = -0.7478961605544612 H2_DY_Z = -0.028697553669992715 H2_DZ_X = 0.7464195025533797 H2_DZ_Y = 0.6637326606996226 H2_DZ_Z = -0.04813399348270053 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 210.1366778263932 H3_P_Y = 146.99789537006131 H3_P_Z = 63.42869580216204 # Orientation: H3_DX_X = 0.6350197384180944 H3_DX_Y = 0.5138342171313184 H3_DX_Z = -0.5768226149558018 H3_DY_X = -0.7722920809061122 H3_DY_Y = 0.43943109451589635 H3_DY_Z = -0.4587649234000466 H3_DZ_X = 0.017744677768973816 H3_DZ_Y = 0.7368003192708272 H3_DZ_Z = 0.675877515481389 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 208.30781898342772 H4_P_Y = 134.93518573854888 H4_P_Z = 51.91079543194376 # Orientation: H4_DX_X = 0.8744921606140679 H4_DX_Y = -0.41867365399275513 H4_DX_Z = 0.24489963755983268 H4_DY_X = -0.4556292705109968 H4_DY_Y = -0.5359273348987301 H4_DY_Z = 0.7107628715415473 H4_DZ_X = -0.16632927847558676 H4_DZ_Y = -0.7331400024283994 H4_DZ_Z = -0.6594242245785935 ############# END of Description of junction: j3