#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 158
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  37
S2_NAME_ID3 = 44
S2_NUM_ID5_ORIG =  37
S2_NUM_ID3_ORIG = 44
S2_NAME2_ID5 =  39
S2_NAME2_ID3 = 42
S2_NUM2_ID5_ORIG =  39
S2_NUM2_ID3_ORIG = 42
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 42
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 36.000526553825175
H1_P_Y = 9.567689946631448
H1_P_Z = 1.9286201420602538
# Orientation:
H1_DX_X = -0.9622818232744379
H1_DX_Y = -0.265978582575519
H1_DX_Z = 0.05717592331342458
H1_DY_X = -0.1992523796482999
H1_DY_Y = 0.8321288618469591
H1_DY_Z = 0.5175519746709201
H1_DZ_X = -0.18523547662397988
H1_DZ_Y = 0.48663841904683025
H1_DZ_Z = -0.8537393438910312
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 39
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 35.28537608643118
H2_P_Y = 3.2496712915014263
H2_P_Z = 21.53598777668475
# Orientation:
H2_DX_X = 0.71277119936547
H2_DX_Y = -0.6821956114490493
H2_DX_Z = -0.16299191720687034
H2_DY_X = 0.6762128844497326
H2_DY_Y = 0.6066563647155672
H2_DY_Z = 0.4179763032209607
H2_DZ_X = -0.18626151577629457
H2_DZ_Y = -0.40813870542960196
H2_DZ_Z = 0.8937166468579214
#############  END of Description of junction: j1