############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 177 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 286 S1_NAME_ID3 = 294 S1_NUM_ID5_ORIG = 286 S1_NUM_ID3_ORIG = 294 S1_NAME2_ID5 = 288 S1_NAME2_ID3 = 292 S1_NUM2_ID5_ORIG = 288 S1_NUM2_ID3_ORIG = 292 S1_SQ2 = CACUG S1_SQLEN2 = 5 S1_SQ = GUCACUGCC S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 263 S2_NAME_ID3 = 270 S2_NUM_ID5_ORIG = 263 S2_NUM_ID3_ORIG = 270 S2_NAME2_ID5 = 265 S2_NAME2_ID3 = 268 S2_NUM2_ID5_ORIG = 265 S2_NUM2_ID3_ORIG = 268 S2_SQ2 = CCCG S2_SQLEN2 = 4 S2_SQ = GGCCCGAC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 288 H1_OUTID2_ORIG = 268 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -63.800298977530986 H1_P_Y = 10.21366686932969 H1_P_Z = -19.507342382657782 # Orientation: H1_DX_X = 0.820369928227322 H1_DX_Y = 0.406654079508991 H1_DX_Z = 0.4020269151176237 H1_DY_X = -0.503247453861988 H1_DY_Y = 0.8472777467225274 H1_DY_Z = 0.16988943489878494 H1_DZ_X = -0.2715422269955923 H1_DZ_Y = -0.3416912049314238 H1_DZ_Z = 0.8997288143828541 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 265 H2_OUTID2_ORIG = 292 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -55.27655076020045 H2_P_Y = 18.73841367285602 H2_P_Z = -40.14428536345225 # Orientation: H2_DX_X = -0.23509703684826633 H2_DX_Y = -0.8847718654864956 H2_DX_Z = -0.40237809248107226 H2_DY_X = -0.944929669917741 H2_DY_Y = 0.3050237323734706 H2_DY_Z = -0.11861046158794863 H2_DZ_X = 0.22767806695927817 H2_DZ_Y = 0.3523340300517397 H2_DZ_Z = -0.90775736245606 ############# END of Description of junction: j2