############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 130 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 30 S1_NAME_ID3 = 38 S1_NUM_ID5_ORIG = 30 S1_NUM_ID3_ORIG = 38 S1_NAME2_ID5 = 32 S1_NAME2_ID3 = 36 S1_NUM2_ID5_ORIG = 32 S1_NUM2_ID3_ORIG = 36 S1_SQ2 = GGGAA S1_SQLEN2 = 5 S1_SQ = CAGGGAAUU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 4 S2_NAME_ID3 = 9 S2_NUM_ID5_ORIG = 4 S2_NUM_ID3_ORIG = 9 S2_NAME2_ID5 = 6 S2_NAME2_ID3 = 7 S2_NUM2_ID5_ORIG = 6 S2_NUM2_ID3_ORIG = 7 S2_SQ2 = UC S2_SQLEN2 = 2 S2_SQ = GAUCUG S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 32 H1_OUTID2_ORIG = 7 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 0.8253737850692966 H1_P_Y = 1.3046543688034813 H1_P_Z = -3.289343230146003 # Orientation: H1_DX_X = 0.6095897651237963 H1_DX_Y = 0.6627658278028727 H1_DX_Z = 0.4349043294255508 H1_DY_X = 0.44359019993119575 H1_DY_Y = 0.16949068274959056 H1_DY_Z = -0.8800571816570102 H1_DZ_X = -0.6569840582398611 H1_DZ_Y = 0.7293931491026293 H1_DZ_Z = -0.19067664057464606 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 6 H2_OUTID2_ORIG = 36 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 8.663767646753023 H2_P_Y = -16.52521711762351 H2_P_Z = 9.992514080600202 # Orientation: H2_DX_X = -0.9619401821382736 H2_DX_Y = 0.22480434566476148 H2_DX_Z = 0.15535151160520222 H2_DY_X = -0.23297449816687887 H2_DY_Y = -0.377589163740776 H2_DY_Z = -0.8961859777018581 H2_DZ_X = -0.14280745495832825 H2_DZ_Y = -0.8982702430759808 H2_DZ_Z = 0.4155918685592219 ############# END of Description of junction: j1