############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 167 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 22 S1_NAME_ID3 = 27 S1_NUM_ID5_ORIG = 22 S1_NUM_ID3_ORIG = 27 S1_NAME2_ID5 = 23 S1_NAME2_ID3 = 26 S1_NUM2_ID5_ORIG = 23 S1_NUM2_ID3_ORIG = 26 S1_SQ2 = AACA S1_SQLEN2 = 4 S1_SQ = AAACAC S1_SQLEN = 6 S1_CHAR = C ## Properties of strand 2 S2_NAME_ID5 = 35 S2_NAME_ID3 = 41 S2_NUM_ID5_ORIG = 35 S2_NUM_ID3_ORIG = 41 S2_NAME2_ID5 = 36 S2_NAME2_ID3 = 40 S2_NUM2_ID5_ORIG = 36 S2_NUM2_ID3_ORIG = 40 S2_SQ2 = GUACA S2_SQLEN2 = 5 S2_SQ = GGUACAU S2_SQLEN = 7 S2_CHAR = D ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 23 H1_OUTID2_ORIG = 40 H1_INSEQ_CHAR = C H1_OUTSEQ_CHAR = D # Position: H1_P_X = 20.71068559404669 H1_P_Y = 17.65025044854108 H1_P_Z = 39.236510816548275 # Orientation: H1_DX_X = 0.569748904463431 H1_DX_Y = 0.3328325606592273 H1_DX_Z = 0.7514044666008672 H1_DY_X = 0.547720159948188 H1_DY_Y = 0.5278656247557691 H1_DY_Z = -0.6491228763397103 H1_DZ_X = -0.6126898173211721 H1_DZ_Y = 0.7813964222891094 H1_DZ_Z = 0.11845175804826624 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 36 H2_OUTID2_ORIG = 26 H2_INSEQ_CHAR = D H2_OUTSEQ_CHAR = C # Position: H2_P_X = 39.89438512098075 H2_P_Y = 7.979836150344914 H2_P_Z = 39.953791846244016 # Orientation: H2_DX_X = -0.14930804431971723 H2_DX_Y = -0.13364975400468992 H2_DX_Z = 0.9797167198511616 H2_DY_X = -0.6437252056222889 H2_DY_Y = -0.7389540628732805 H2_DY_Z = -0.19890890530495398 H2_DZ_X = 0.7505497768622433 H2_DZ_Y = -0.6603670465866358 H2_DZ_Z = 0.02429807059168354 ############# END of Description of junction: j3