#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS1
FINGERPRINT = 173
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  3
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  3
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = AGU
S1_SQLEN2 = 3
S1_SQ = CCAGUCC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 12
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 12
S2_NAME2_ID5 =  8
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  8
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = UAA
S2_SQLEN2 = 3
S2_SQ = GAUAAGG
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 39.28075281141403
H1_P_Y = 27.27060481413979
H1_P_Z = 50.51416498117738
# Orientation:
H1_DX_X = -0.2661327691995794
H1_DX_Y = -0.46378266371378984
H1_DX_Z = -0.8450319461397342
H1_DY_X = -0.9309213444478459
H1_DY_Y = 0.3511281066446301
H1_DY_Z = 0.10047140476560656
H1_DZ_X = 0.2501175715730142
H1_DZ_Y = 0.8133970085774216
H1_DZ_Z = -0.525191876201184
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 8
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 31.115453026264735
H2_P_Y = 9.013881480330149
H2_P_Z = 59.56143612645437
# Orientation:
H2_DX_X = 0.9686033748503924
H2_DX_Y = 0.010150468367065457
H2_DX_Z = 0.2484038450192756
H2_DY_X = -0.20505021406404822
H2_DY_Y = 0.5975956146608912
H2_DY_Z = 0.7751347567038636
H2_DZ_X = -0.14057706762028843
H2_DZ_Y = -0.8017334029027356
H2_DZ_Z = 0.5809144848678542
#############  END of Description of junction: j1