#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 176
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 12
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 12
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = GUGAAGUC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  24
S2_NAME_ID3 = 30
S2_NUM_ID5_ORIG =  24
S2_NUM_ID3_ORIG = 30
S2_NAME2_ID5 =  26
S2_NAME2_ID3 = 28
S2_NUM2_ID5_ORIG =  26
S2_NUM2_ID3_ORIG = 28
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = GUCACAC
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 28
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 15.104625611767908
H1_P_Y = 12.245647095154101
H1_P_Z = 1.1903673530636076
# Orientation:
H1_DX_X = 0.21398531499318274
H1_DX_Y = -0.04455769642460794
H1_DX_Z = -0.9758201149067374
H1_DY_X = -0.976752753537248
H1_DY_Y = -0.02286991659825688
H1_DY_Z = -0.21314554973583844
H1_DZ_X = -0.012819649943432765
H1_DZ_Y = 0.9987450017918107
H1_DZ_Z = -0.04841567898115828
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 26
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 16.220612329298596
H2_P_Y = -7.924741946354324
H2_P_Z = 0.41020539352328056
# Orientation:
H2_DX_X = 0.8397075952969217
H2_DX_Y = 0.03921160826198733
H2_DX_Z = 0.5416212737496235
H2_DY_X = -0.5402670840696686
H2_DY_Y = -0.04031942804935884
H2_DY_Z = 0.8405271093740114
H2_DZ_X = 0.054796279723305474
H2_DZ_Y = -0.9984171440331346
H2_DZ_Z = -0.012671788713686682
#############  END of Description of junction: j1