#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS3HS4
FINGERPRINT = 158
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 14
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 14
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 12
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 12
S1_SQ2 = GAAGUC
S1_SQLEN2 = 6
S1_SQ = GUGAAGUCGC
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  22
S2_NAME_ID3 = 30
S2_NUM_ID5_ORIG =  22
S2_NUM_ID3_ORIG = 30
S2_NAME2_ID5 =  24
S2_NAME2_ID3 = 28
S2_NUM2_ID5_ORIG =  24
S2_NUM2_ID3_ORIG = 28
S2_SQ2 = GUCAC
S2_SQLEN2 = 5
S2_SQ = GCGUCACAC
S2_SQLEN = 9
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 9
H1_INID2 = 3
H1_OUTID2 = 7
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 28
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 27.487096192638575
H1_P_Y = 27.533404460459042
H1_P_Z = 30.414897966161593
# Orientation:
H1_DX_X = -0.7785604835897608
H1_DX_Y = -0.5815385797204051
H1_DX_Z = -0.23591620056548024
H1_DY_X = -0.6188670309007342
H1_DY_Y = 0.7738368796559634
H1_DY_Z = 0.134833533471582
H1_DZ_X = 0.10414975495213596
H1_DZ_Y = 0.2509768196090931
H1_DZ_Z = -0.962373869430337
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 24
H2_OUTID2_ORIG = 12
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 31.399583180318977
H2_P_Y = 20.8275732857734
H2_P_Z = 55.92410681125193
# Orientation:
H2_DX_X = 0.7851923903150038
H2_DX_Y = 0.6159623291534082
H2_DX_Z = -0.06374417036342095
H2_DY_X = -0.5579779318001314
H2_DY_Y = 0.7483856985044639
H2_DY_Z = 0.35857980129677713
H2_DZ_X = 0.26857687505714267
H2_DZ_Y = -0.24598629095520153
H2_DZ_Z = 0.9313201419740906
#############  END of Description of junction: j1