#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 165
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  17
S1_NAME_ID3 = 24
S1_NUM_ID5_ORIG =  17
S1_NUM_ID3_ORIG = 24
S1_NAME2_ID5 =  19
S1_NAME2_ID3 = 22
S1_NUM2_ID5_ORIG =  19
S1_NUM2_ID3_ORIG = 22
S1_SQ2 = UAUC
S1_SQLEN2 = 4
S1_SQ = CCUAUCGC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 10
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 10
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 8
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 8
S2_SQ2 = GGG
S2_SQLEN2 = 3
S2_SQ = GCGGGGG
S2_SQLEN = 7
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 19
H1_OUTID2_ORIG = 8
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -1.7032122294996959
H1_P_Y = 10.827218599410891
H1_P_Z = 1.1781310095369668
# Orientation:
H1_DX_X = 0.9517552687783422
H1_DX_Y = 0.097430688112496
H1_DX_Z = 0.2909796717411568
H1_DY_X = 0.2876017481241553
H1_DY_Y = 0.04739645160499428
H1_DY_Z = -0.9565766100272295
H1_DZ_X = -0.10699132127698907
H1_DZ_Y = 0.9941130908448912
H1_DZ_Z = 0.017088586314357723
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 22
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 0.4787586249603697
H2_P_Y = -11.465259864092246
H2_P_Z = 1.9824139500171585
# Orientation:
H2_DX_X = -0.915955078391573
H2_DX_Y = 0.13784227049566056
H2_DX_Z = 0.37686310887812846
H2_DY_X = -0.3673719213262244
H2_DY_Y = 0.08979211450559532
H2_DY_Z = -0.9257295758447457
H2_DZ_X = -0.16144400202474518
H2_DZ_Y = -0.986375630597804
H2_DZ_Z = -0.03160616352895573
#############  END of Description of junction: j1