############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 141 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 179 S1_NAME_ID3 = 185 S1_NUM_ID5_ORIG = 179 S1_NUM_ID3_ORIG = 185 S1_NAME2_ID5 = 180 S1_NAME2_ID3 = 184 S1_NUM2_ID5_ORIG = 180 S1_NUM2_ID3_ORIG = 184 S1_SQ2 = UAACG S1_SQLEN2 = 5 S1_SQ = AUAACGU S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 192 S2_NAME_ID3 = 196 S2_NUM_ID5_ORIG = 192 S2_NUM_ID3_ORIG = 196 S2_NAME2_ID5 = 193 S2_NAME2_ID3 = 195 S2_NUM2_ID5_ORIG = 193 S2_NUM2_ID3_ORIG = 195 S2_SQ2 = CCA S2_SQLEN2 = 3 S2_SQ = ACCAA S2_SQLEN = 5 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 180 H1_OUTID2_ORIG = 195 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 29.890166360241317 H1_P_Y = -65.67486939650524 H1_P_Z = 8.554405255180658 # Orientation: H1_DX_X = 0.4469335458826862 H1_DX_Y = 0.4043361430239827 H1_DX_Z = 0.797974115500752 H1_DY_X = -0.5772799663722914 H1_DY_Y = -0.5510683396268803 H1_DY_Z = 0.6025541680928512 H1_DZ_X = 0.6833726991839342 H1_DZ_Y = -0.7299561414943696 H1_DZ_Z = -0.01287577200514356 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 193 H2_OUTID2_ORIG = 184 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 17.595941035108318 H2_P_Y = -47.20641525330413 H2_P_Z = 10.435385701761223 # Orientation: H2_DX_X = 0.9530051756222093 H2_DX_Y = 0.10897465935488526 H2_DX_Z = -0.2826758901211246 H2_DY_X = -0.1853770578970071 H2_DY_Y = -0.528235038979922 H2_DY_Z = -0.8286151639931134 H2_DZ_X = -0.23961736506925746 H2_DZ_Y = 0.8420761647335553 H2_DZ_Z = -0.4832093243563236 ############# END of Description of junction: j9