############# Start of Description of junction: j23 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 37:48:133:138:155:172 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1292 S1_NAME_ID3 = 1297 S1_NUM_ID5_ORIG = 1292 S1_NUM_ID3_ORIG = 1297 S1_NAME2_ID5 = 1294 S1_NAME2_ID3 = 1295 S1_NUM2_ID5_ORIG = 1294 S1_NUM2_ID3_ORIG = 1295 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GCUCGC S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 1268 S2_NAME_ID3 = 1278 S2_NUM_ID5_ORIG = 1268 S2_NUM_ID3_ORIG = 1278 S2_NAME2_ID5 = 1270 S2_NAME2_ID3 = 1276 S2_NUM2_ID5_ORIG = 1270 S2_NUM2_ID3_ORIG = 1276 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAGC S2_SQLEN = 11 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 1643 S3_NAME_ID3 = 1650 S3_NUM_ID5_ORIG = 1643 S3_NUM_ID3_ORIG = 1650 S3_NAME2_ID5 = 1645 S3_NAME2_ID3 = 1648 S3_NUM2_ID5_ORIG = 1645 S3_NUM2_ID3_ORIG = 1648 S3_SQ2 = GCUU S3_SQLEN2 = 4 S3_SQ = GCGCUUGA S3_SQLEN = 8 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 2007 S4_NAME_ID3 = 2012 S4_NUM_ID5_ORIG = 2007 S4_NUM_ID3_ORIG = 2012 S4_NAME2_ID5 = 2009 S4_NAME2_ID3 = 2010 S4_NUM2_ID5_ORIG = 2009 S4_NUM2_ID3_ORIG = 2010 S4_SQ2 = AG S4_SQLEN2 = 2 S4_SQ = UCAGUG S4_SQLEN = 6 S4_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1294 H1_OUTID2_ORIG = 1276 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 36.99040103219955 H1_P_Y = -76.70198241689143 H1_P_Z = -87.49166488737019 # Orientation: H1_DX_X = 0.2407455335378117 H1_DX_Y = -0.6551236728857077 H1_DX_Z = 0.7161386467062982 H1_DY_X = -0.9567907526682333 H1_DY_Y = -0.284155844652048 H1_DY_Z = 0.061700174704967026 H1_DZ_X = 0.16307373697239314 H1_DZ_Y = -0.7000488762756589 H1_DZ_Z = -0.6952255224997401 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1645 H2_OUTID2_ORIG = 1295 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 33.228367737517495 H2_P_Y = -62.5330385428506 H2_P_Z = -74.88057503426867 # Orientation: H2_DX_X = 0.9965289374759436 H2_DX_Y = 0.013720094705767849 H2_DX_Z = 0.08210868269750904 H2_DY_X = 0.040910680351124995 H2_DY_Y = 0.7782901321760534 H2_DY_Z = -0.6265706555454074 H2_DZ_X = -0.07250098624337653 H2_DZ_Y = 0.627754911696158 H2_DZ_Z = 0.7750273400565248 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2009 H3_OUTID2_ORIG = 1648 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 59.82889104020752 H3_P_Y = -74.08670559008846 H3_P_Z = -84.38487024842617 # Orientation: H3_DX_X = -0.7957063917617972 H3_DX_Y = -0.597541935963747 H3_DX_Z = -0.09896955528904527 H3_DY_X = 0.5859328763470515 H3_DY_Y = -0.8008012608102888 H3_DY_Z = 0.12409675700973821 H3_DZ_X = -0.1534079610877157 H3_DZ_Y = 0.040755066548243235 H3_DZ_Z = 0.9873221470348739 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1270 H4_OUTID2_ORIG = 2010 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = 65.14757005722252 H4_P_Y = -75.28251750366084 H4_P_Z = -98.79788826647845 # Orientation: H4_DX_X = -0.5939977845377911 H4_DX_Y = 0.6981976110867407 H4_DX_Z = -0.39960821792969625 H4_DY_X = 0.5821861225115441 H4_DY_Y = 0.715895504625621 H4_DY_Z = 0.385425667557044 H4_DZ_X = 0.5551810071671639 H4_DZ_Y = -0.0037043662873514904 H4_DZ_Z = -0.8317213036536089 ############# END of Description of junction: j23