############# Start of Description of junction: k3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS4HS12 FINGERPRINT = 61 LOOP_LENGTH_SUM = 16 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1447 S1_NAME_ID3 = 1464 S1_NUM_ID5_ORIG = 1447 S1_NUM_ID3_ORIG = 1464 S1_NAME2_ID5 = 1449 S1_NAME2_ID3 = 1462 S1_NUM2_ID5_ORIG = 1449 S1_NUM2_ID3_ORIG = 1462 S1_SQ2 = GGCGACGGUUGUCC S1_SQLEN2 = 14 S1_SQ = CGGGCGACGGUUGUCCCG S1_SQLEN = 18 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 2699 S2_NAME_ID3 = 2708 S2_NUM_ID5_ORIG = 2699 S2_NUM_ID3_ORIG = 2708 S2_NAME2_ID5 = 2701 S2_NAME2_ID3 = 2706 S2_NUM2_ID5_ORIG = 2701 S2_NUM2_ID3_ORIG = 2706 S2_SQ2 = UGCCAA S2_SQLEN2 = 6 S2_SQ = CAUGCCAAUG S2_SQLEN = 10 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 18 H1_INID2 = 3 H1_OUTID2 = 16 H1_INID2_ORIG = 1449 H1_OUTID2_ORIG = 1462 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 12.004341737612549 H1_P_Y = -59.76037767793565 H1_P_Z = -61.29187527633659 # Orientation: H1_DX_X = 0.4450246342051578 H1_DX_Y = -0.36052874859529993 H1_DX_Z = -0.8197390416387833 H1_DY_X = -0.8084194310201145 H1_DY_Y = 0.23204774221101587 H1_DY_Z = -0.5409361042525163 H1_DZ_X = 0.3852416105506844 H1_DZ_Y = 0.9034228615499345 H1_DZ_Z = -0.1881914842102148 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 2701 H2_OUTID2_ORIG = 2706 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 37.39032938167877 H2_P_Y = -66.10405828740056 H2_P_Z = -57.4743517047668 # Orientation: H2_DX_X = 0.0670043968073486 H2_DX_Y = -0.8628839826605912 H2_DX_Z = -0.5009407582502021 H2_DY_X = -0.08049563888389599 H2_DY_Y = 0.4957574677929699 H2_DY_Z = -0.8647224903101502 H2_DZ_X = 0.9945003081594095 H2_DZ_Y = 0.09826375524731645 H2_DZ_Z = -0.03624046737473918 ############# END of Description of junction: k3