############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 140 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 179 S1_NAME_ID3 = 185 S1_NUM_ID5_ORIG = 179 S1_NUM_ID3_ORIG = 185 S1_NAME2_ID5 = 180 S1_NAME2_ID3 = 184 S1_NUM2_ID5_ORIG = 180 S1_NUM2_ID3_ORIG = 184 S1_SQ2 = UAACG S1_SQLEN2 = 5 S1_SQ = AUAACGU S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 192 S2_NAME_ID3 = 196 S2_NUM_ID5_ORIG = 192 S2_NUM_ID3_ORIG = 196 S2_NAME2_ID5 = 193 S2_NAME2_ID3 = 195 S2_NUM2_ID5_ORIG = 193 S2_NUM2_ID3_ORIG = 195 S2_SQ2 = CCA S2_SQLEN2 = 3 S2_SQ = ACCAA S2_SQLEN = 5 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 180 H1_OUTID2_ORIG = 195 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -45.8206733022284 H1_P_Y = 82.20998299797785 H1_P_Z = -142.09371531559322 # Orientation: H1_DX_X = 0.4728452930890228 H1_DX_Y = -0.7952686684640184 H1_DX_Z = 0.379427297071544 H1_DY_X = -0.7210667024957047 H1_DY_Y = -0.5967227658224488 H1_DY_Z = -0.35211468487011643 H1_DZ_X = 0.5064386827203649 H1_DZ_Y = -0.10709661856787989 H1_DZ_Z = -0.8555993074656953 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 193 H2_OUTID2_ORIG = 184 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -53.64600435290238 H2_P_Y = 82.69978359450435 H2_P_Z = -121.25439927722033 # Orientation: H2_DX_X = 0.9765556578549024 H2_DX_Y = 0.17697141560539364 H2_DX_Z = -0.12255678345239573 H2_DY_X = -0.21526350597197563 H2_DY_Y = 0.804994733761589 H2_DY_Z = -0.5528517899154934 H2_DZ_X = 8.186013846227524E-4 H2_DZ_Y = 0.5662725462837983 H2_DZ_Z = 0.8242176491783226 ############# END of Description of junction: j9