############# Start of Description of junction: j21 # Number of strands: NUM_STRANDS = 3 LILLEY = HS3HS4HS5 FINGERPRINT = 62:144:146 LOOP_LENGTH_SUM = 12 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1105 S1_NAME_ID3 = 1115 S1_NUM_ID5_ORIG = 1105 S1_NUM_ID3_ORIG = 1115 S1_NAME2_ID5 = 1107 S1_NAME2_ID3 = 1113 S1_NUM2_ID5_ORIG = 1107 S1_NUM2_ID3_ORIG = 1113 S1_SQ2 = CGCAACC S1_SQLEN2 = 7 S1_SQ = AGCGCAACCCU S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1062 S2_NAME_ID3 = 1070 S2_NUM_ID5_ORIG = 1062 S2_NUM_ID3_ORIG = 1070 S2_NAME2_ID5 = 1064 S2_NAME2_ID3 = 1068 S2_NUM2_ID5_ORIG = 1064 S2_NUM2_ID3_ORIG = 1068 S2_SQ2 = GUCAG S2_SQLEN2 = 5 S2_SQ = UCGUCAGCU S2_SQLEN = 9 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1185 S3_NAME_ID3 = 1194 S3_NUM_ID5_ORIG = 1185 S3_NUM_ID3_ORIG = 1194 S3_NAME2_ID5 = 1187 S3_NAME2_ID3 = 1192 S3_NUM2_ID5_ORIG = 1187 S3_NUM2_ID3_ORIG = 1192 S3_SQ2 = GAUGAC S3_SQLEN2 = 6 S3_SQ = GGGAUGACGU S3_SQLEN = 10 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 1107 H1_OUTID2_ORIG = 1068 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 50.51279729421882 H1_P_Y = 98.00298872205916 H1_P_Z = -49.47010622132266 # Orientation: H1_DX_X = 0.40381364296047906 H1_DX_Y = 0.035452268757396155 H1_DX_Z = -0.9141540780409798 H1_DY_X = 0.32085993590611395 H1_DY_Y = -0.9412625835580002 H1_DY_Z = 0.10523141319994522 H1_DZ_X = -0.8567283369244407 H1_DZ_Y = -0.33580929920668723 H1_DZ_Z = -0.3914698855301637 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 1187 H2_OUTID2_ORIG = 1113 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 80.46993516139516 H2_P_Y = 107.4727244552241 H2_P_Z = -36.75581406507163 # Orientation: H2_DX_X = 0.800564646650713 H2_DX_Y = 0.13306938502837795 H2_DX_Z = -0.5842848494537307 H2_DY_X = -0.08201108505113552 H2_DY_Y = 0.9901881286150598 H2_DY_Z = 0.11314438509506175 H2_DZ_X = 0.5936079754027332 H2_DZ_Y = -0.04266156019150458 H2_DZ_Z = 0.8036227739557233 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 3 H3_OUTID2 = 8 H3_INID2_ORIG = 1064 H3_OUTID2_ORIG = 1192 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.47858099859516 H3_P_Y = 107.95498869523767 H3_P_Z = -67.32401882372214 # Orientation: H3_DX_X = -0.9693638045953321 H3_DX_Y = 0.24188895306080838 H3_DX_Z = 0.04270302948977189 H3_DY_X = 0.23731760548196235 H3_DY_Y = 0.9671426844519999 H3_DY_Z = -0.09118871662265349 H3_DZ_X = -0.0633574657697693 H3_DZ_Y = -0.078260860576151 H3_DZ_Z = -0.9949176193198639 ############# END of Description of junction: j21