#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS2
FINGERPRINT = 176
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2736
S1_NAME_ID3 = 2743
S1_NUM_ID5_ORIG =  2736
S1_NUM_ID3_ORIG = 2743
S1_NAME2_ID5 =  2738
S1_NAME2_ID3 = 2741
S1_NUM2_ID5_ORIG =  2738
S1_NUM2_ID3_ORIG = 2741
S1_SQ2 = AUAA
S1_SQLEN2 = 4
S1_SQ = AGAUAAGU
S1_SQLEN = 8
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  2761
S2_NAME_ID3 = 2768
S2_NUM_ID5_ORIG =  2761
S2_NUM_ID3_ORIG = 2768
S2_NAME2_ID5 =  2763
S2_NAME2_ID3 = 2766
S2_NUM2_ID5_ORIG =  2763
S2_NUM2_ID3_ORIG = 2766
S2_SQ2 = GAAA
S2_SQLEN2 = 4
S2_SQ = ACGAAACU
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 2738
H1_OUTID2_ORIG = 2766
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 32.989041928399345
H1_P_Y = 140.3953665715797
H1_P_Z = -184.6594281896812
# Orientation:
H1_DX_X = 0.20669164372769444
H1_DX_Y = 0.9264781610416435
H1_DX_Z = -0.31451038381274543
H1_DY_X = -0.028571023681386976
H1_DY_Y = -0.31559929839963274
H1_DY_Z = -0.9484623236878917
H1_DZ_X = -0.9779888859383519
H1_DZ_Y = 0.20502512032078357
H1_DZ_Z = -0.03876130826611757
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 2763
H2_OUTID2_ORIG = 2741
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 57.041305147043
H2_P_Y = 140.04936669715488
H2_P_Z = -187.74669986412036
# Orientation:
H2_DX_X = -0.1261896153282791
H2_DX_Y = -0.6883748784148622
H2_DX_Z = 0.7142942025178343
H2_DY_X = -0.17060218320571607
H2_DY_Y = -0.6942628476551249
H2_DY_Z = -0.6992095490275005
H2_DZ_X = 0.9772262154019131
H2_DZ_Y = -0.210093134426387
H2_DZ_Z = -0.029829495439230413
#############  END of Description of junction: j41