############# Start of Description of junction: j19 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 38:47:132:138:154:171 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1292 S1_NAME_ID3 = 1297 S1_NUM_ID5_ORIG = 1292 S1_NUM_ID3_ORIG = 1297 S1_NAME2_ID5 = 1294 S1_NAME2_ID3 = 1295 S1_NUM2_ID5_ORIG = 1294 S1_NUM2_ID3_ORIG = 1295 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GCUCGC S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 1268 S2_NAME_ID3 = 1278 S2_NUM_ID5_ORIG = 1268 S2_NUM_ID3_ORIG = 1278 S2_NAME2_ID5 = 1270 S2_NAME2_ID3 = 1276 S2_NUM2_ID5_ORIG = 1270 S2_NUM2_ID3_ORIG = 1276 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAGC S2_SQLEN = 11 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 1643 S3_NAME_ID3 = 1650 S3_NUM_ID5_ORIG = 1643 S3_NUM_ID3_ORIG = 1650 S3_NAME2_ID5 = 1645 S3_NAME2_ID3 = 1648 S3_NUM2_ID5_ORIG = 1645 S3_NUM2_ID3_ORIG = 1648 S3_SQ2 = GCUU S3_SQLEN2 = 4 S3_SQ = GCGCUUGA S3_SQLEN = 8 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 2007 S4_NAME_ID3 = 2012 S4_NUM_ID5_ORIG = 2007 S4_NUM_ID3_ORIG = 2012 S4_NAME2_ID5 = 2009 S4_NAME2_ID3 = 2010 S4_NUM2_ID5_ORIG = 2009 S4_NUM2_ID3_ORIG = 2010 S4_SQ2 = AG S4_SQLEN2 = 2 S4_SQ = UCAGUG S4_SQLEN = 6 S4_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1294 H1_OUTID2_ORIG = 1276 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = -32.05291692961433 H1_P_Y = 175.48816930439463 H1_P_Z = -165.3362092054365 # Orientation: H1_DX_X = 0.011506944865821822 H1_DX_Y = -0.7812207332729315 H1_DX_Z = -0.6241488253008072 H1_DY_X = -0.9960731351476824 H1_DY_Y = 0.04584172116926766 H1_DY_Z = -0.07574197011751949 H1_DZ_X = 0.08778325385231511 H1_DZ_Y = 0.6225694358902842 H1_DZ_Z = -0.7776254868755075 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1645 H2_OUTID2_ORIG = 1295 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = -33.96804472447384 H2_P_Y = 164.83943443213673 H2_P_Z = -149.6006032862053 # Orientation: H2_DX_X = 0.9736619034356195 H2_DX_Y = -0.15094421602074704 H2_DX_Z = -0.1708752218667371 H2_DY_X = 0.22755116495986982 H2_DY_Y = 0.6901798318363888 H2_DY_Z = 0.6869295939553695 H2_DZ_X = 0.014246582871983549 H2_DZ_Y = -0.7077200317754091 H2_DZ_Z = 0.7063493409781643 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2009 H3_OUTID2_ORIG = 1648 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = -9.766980063385986 H3_P_Y = 170.1485924407325 H3_P_Z = -167.00198279544114 # Orientation: H3_DX_X = -0.882497406008099 H3_DX_Y = 0.14381516649910964 H3_DX_Z = -0.4477896004529498 H3_DY_X = 0.40508349656831655 H3_DY_Y = -0.251338184221936 H3_DY_Z = -0.8790543088797165 H3_DZ_X = -0.23896796688459077 H3_DZ_Y = -0.9571553244050222 H3_DZ_Z = 0.16354814510162896 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1270 H4_OUTID2_ORIG = 2010 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = -3.150464688375905 H4_P_Y = 183.5296148779028 H4_P_Z = -170.87950267243144 # Orientation: H4_DX_X = -0.3884758422167276 H4_DX_Y = 0.5520191237434062 H4_DX_Z = 0.7378085165105688 H4_DY_X = 0.6662689631384913 H4_DY_Y = -0.3848365079301743 H4_DY_Z = 0.638738233490443 H4_DZ_X = 0.6365313729678892 H4_DZ_Y = 0.7397132885014628 H4_DZ_Z = -0.21829352267522495 ############# END of Description of junction: j19