#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 69:83:102:106:152:170
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  523
S1_NAME_ID3 = 528
S1_NUM_ID5_ORIG =  523
S1_NUM_ID3_ORIG = 528
S1_NAME2_ID5 =  525
S1_NAME2_ID3 = 526
S1_NUM2_ID5_ORIG =  525
S1_NUM2_ID3_ORIG = 526
S1_SQ2 = CG
S1_SQLEN2 = 2
S1_SQ = CGCGUC
S1_SQLEN = 6
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  505
S2_NAME_ID3 = 512
S2_NUM_ID5_ORIG =  505
S2_NUM_ID3_ORIG = 512
S2_NAME2_ID5 =  507
S2_NAME2_ID3 = 510
S2_NUM2_ID5_ORIG =  507
S2_NUM2_ID3_ORIG = 510
S2_SQ2 = GUGG
S2_SQLEN2 = 4
S2_SQ = UCGUGGCG
S2_SQLEN = 8
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  542
S3_NAME_ID3 = 551
S3_NUM_ID5_ORIG =  542
S3_NUM_ID3_ORIG = 551
S3_NAME2_ID5 =  544
S3_NAME2_ID3 = 549
S3_NUM2_ID5_ORIG =  544
S3_NUM2_ID3_ORIG = 549
S3_SQ2 = AGGUUG
S3_SQLEN2 = 6
S3_SQ = GAAGGUUGCG
S3_SQLEN = 10
S3_CHAR = C
## Properties of strand 4
S4_NAME_ID5 =  563
S4_NAME_ID3 = 568
S4_NUM_ID5_ORIG =  563
S4_NUM_ID3_ORIG = 568
S4_NAME2_ID5 =  565
S4_NAME2_ID3 = 566
S4_NUM2_ID5_ORIG =  565
S4_NUM2_ID3_ORIG = 566
S4_SQ2 = UC
S4_SQLEN2 = 2
S4_SQ = CGUCGG
S4_SQLEN = 6
S4_CHAR = C
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 525
H1_OUTID2_ORIG = 510
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = 61.82434448855496
H1_P_Y = -19.47047914742757
H1_P_Z = -1.2731622877431663
# Orientation:
H1_DX_X = -0.8811127109447412
H1_DX_Y = -0.06865301392593537
H1_DX_Z = -0.467896520921556
H1_DY_X = 0.2170834715778227
H1_DY_Y = -0.9377209461629796
H1_DY_Z = -0.27120876367647817
H1_DZ_X = -0.4201370692754125
H1_DZ_Y = -0.3405380900957873
H1_DZ_Z = 0.8411412795806541
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 3
H2_OUTID2 = 4
H2_INID2_ORIG = 544
H2_OUTID2_ORIG = 526
H2_INSEQ_CHAR = C
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 68.06621925172375
H2_P_Y = -17.5192320667553
H2_P_Z = -20.90584651778221
# Orientation:
H2_DX_X = 0.08414371217027394
H2_DX_Y = 0.9277359050999685
H2_DX_Z = 0.3636288301146564
H2_DY_X = 0.9947893818910671
H2_DY_Y = -0.05712796058971392
H2_DY_Z = -0.08444218019233318
H2_DZ_X = -0.05756666899327456
H2_DZ_Y = 0.36883937765267305
H2_DZ_Z = -0.9277087862652849
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 3
H3_OUTID2 = 8
H3_INID2_ORIG = 565
H3_OUTID2_ORIG = 549
H3_INSEQ_CHAR = C
H3_OUTSEQ_CHAR = C
# Position:
H3_P_X = 60.761085302425556
H3_P_Y = -18.0073685670476
H3_P_Z = 16.077905774234143
# Orientation:
H3_DX_X = 0.15907571210461668
H3_DX_Y = 0.9720614968537546
H3_DX_Z = 0.1726017501442243
H3_DY_X = -0.19077955432026528
H3_DY_Y = -0.14126629500817245
H3_DY_Z = 0.9714149450919685
H3_DZ_X = 0.9686578753470059
H3_DZ_Y = -0.18745740910698316
H3_DZ_Z = 0.16297742266684523
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 507
H4_OUTID2_ORIG = 566
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = C
# Position:
H4_P_X = 44.01754156586724
H4_P_Y = -15.340309188059994
H4_P_Z = 14.492940251475998
# Orientation:
H4_DX_X = 0.07089969502025895
H4_DX_Y = 0.43696999861978014
H4_DX_Z = -0.8966774523496532
H4_DY_X = -0.15547997159571025
H4_DY_Y = -0.8831108748875955
H4_DY_Z = -0.4426524156580012
H4_DZ_X = -0.9852914348956006
H4_DZ_Y = 0.17079930609196836
H4_DZ_Z = 0.005327791274979177
#############  END of Description of junction: j1