#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 13:14:166:168:177:179
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  6
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  6
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAGG
S1_SQLEN2 = 4
S1_SQ = UGAGGU
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = ACACA
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  14
S3_NAME_ID3 = 18
S3_NUM_ID5_ORIG =  14
S3_NUM_ID3_ORIG = 18
S3_NAME2_ID5 =  15
S3_NAME2_ID3 = 17
S3_NUM2_ID5_ORIG =  15
S3_NUM2_ID3_ORIG = 17
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = ACACA
S3_SQLEN = 5
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  6
S4_NAME_ID3 = 11
S4_NUM_ID5_ORIG =  6
S4_NUM_ID3_ORIG = 11
S4_NAME2_ID5 =  7
S4_NAME2_ID3 = 10
S4_NUM2_ID5_ORIG =  7
S4_NUM2_ID3_ORIG = 10
S4_SQ2 = GAGG
S4_SQLEN2 = 4
S4_SQ = UGAGGU
S4_SQLEN = 6
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 24.74955893979409
H1_P_Y = 72.37065064572778
H1_P_Z = 56.67822824100922
# Orientation:
H1_DX_X = -0.5413202235838881
H1_DX_Y = 0.0771423033420433
H1_DX_Z = 0.8372702553979678
H1_DY_X = 0.8275675434076923
H1_DY_Y = -0.127195005638697
H1_DY_Z = 0.546766304410518
H1_DZ_X = 0.14867540696850057
H1_DZ_Y = 0.9888733465796662
H1_DZ_Z = 0.005012762421507944
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 16.93093980411074
H2_P_Y = 54.83992618846576
H2_P_Z = 57.60809983775332
# Orientation:
H2_DX_X = 0.9074392967050073
H2_DX_Y = -0.3591553468701463
H2_DX_Z = 0.2180856703456442
H2_DY_X = 0.2064554502282796
H2_DY_Y = -0.07094369642924647
H2_DY_Z = -0.975880699167675
H2_DZ_X = 0.3659645746060143
H2_DZ_Y = 0.9305774705802534
H2_DZ_Z = 0.009772480846564235
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 7
H3_OUTID2_ORIG = 17
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 11.805016950344132
H3_P_Y = 40.83514247859821
H3_P_Z = 56.51623647135194
# Orientation:
H3_DX_X = 0.33759057347207566
H3_DX_Y = -0.044314616756999214
H3_DX_Z = 0.9402493389758249
H3_DY_X = -0.9277014146363189
H3_DY_Y = 0.15347113003114998
H3_DY_Z = 0.34031852363445125
H3_DZ_X = -0.15938221351382786
H3_DZ_Y = -0.9871589674356613
H3_DZ_Z = 0.010699674144085236
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 15
H4_OUTID2_ORIG = 10
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 18.79859661744662
H4_P_Y = 58.052554182127366
H4_P_Z = 57.74050728371092
# Orientation:
H4_DX_X = -0.9243048398761466
H4_DX_Y = 0.381235738869556
H4_DX_Z = -0.017885032572088733
H4_DY_X = 0.04165366551212557
H4_DY_Y = 0.054185560954927325
H4_DY_Z = -0.9976617147778057
H4_DZ_X = -0.3793751904525777
H4_DZ_Y = -0.9228885286927024
H4_DZ_Z = -0.06596384219018603
#############  END of Description of junction: j1