#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 154
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  3
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  3
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  33
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  33
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  35
S2_NAME2_ID3 = 38
S2_NUM2_ID5_ORIG =  35
S2_NUM2_ID3_ORIG = 38
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 38
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 52.682362642524154
H1_P_Y = 0.9089992279897112
H1_P_Z = -3.4692250997983307
# Orientation:
H1_DX_X = 0.5008304990023049
H1_DX_Y = 0.7070122469092777
H1_DX_Z = 0.49930200679488124
H1_DY_X = -0.3829588697998929
H1_DY_Y = -0.33632346395696067
H1_DY_Z = 0.8603656383384806
H1_DZ_X = 0.7762160236111413
H1_DZ_Y = -0.622109484184485
H1_DZ_Z = 0.10231556273131437
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 35
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 37.12604062920795
H2_P_Y = 14.861681159096051
H2_P_Z = -0.2566893144357185
# Orientation:
H2_DX_X = -0.16947901039095825
H2_DX_Y = 0.2858418270410006
H2_DX_Z = -0.9431708832182846
H2_DY_X = -0.726344131753379
H2_DY_Y = -0.6830613360384685
H2_DY_Z = -0.07649453233255032
H2_DZ_X = -0.6661089004842466
H2_DZ_Y = 0.6721024186262134
H2_DZ_Z = 0.3233840929490182
#############  END of Description of junction: j1