#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 153
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  3
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  3
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  33
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  33
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  35
S2_NAME2_ID3 = 38
S2_NUM2_ID5_ORIG =  35
S2_NUM2_ID3_ORIG = 38
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 38
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 52.78450639263475
H1_P_Y = 0.8213840587863315
H1_P_Z = -3.4431393656436677
# Orientation:
H1_DX_X = 0.48594609272213773
H1_DX_Y = 0.7233507574351687
H1_DX_Z = 0.49053040342679965
H1_DY_X = -0.39003637051008866
H1_DY_Y = -0.3227796247969179
H1_DY_Z = 0.8623716968310577
H1_DZ_X = 0.7821304396629785
H1_DZ_Y = -0.6103908547266483
H1_DZ_Z = 0.1252796065553583
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 35
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 37.060377220770434
H2_P_Y = 15.051018762439455
H2_P_Z = -0.58063656842177
# Orientation:
H2_DX_X = -0.16385935427705078
H2_DX_Y = 0.29468206090353455
H2_DX_Z = -0.9414417639968773
H2_DY_X = -0.7119700022397168
H2_DY_Y = -0.6959025606780926
H2_DY_Z = -0.09390602724241526
H2_DZ_X = -0.6828241559337869
H2_DZ_Y = 0.6548909138347536
H2_DZ_Z = 0.32383493179395406
#############  END of Description of junction: j1