#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 78:87:87:106:161:165
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 27
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 27
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = CG
S1_SQLEN2 = 2
S1_SQ = GCGC
S1_SQLEN = 4
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUGG
S2_SQLEN2 = 4
S2_SQ = GGUGGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  43
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  43
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  44
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  44
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = UGCGUG
S3_SQLEN2 = 6
S3_SQ = GUGCGUGC
S3_SQLEN = 8
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = CC
S4_SQLEN2 = 2
S4_SQ = GCCC
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 24.835762001983966
H1_P_Y = 32.32120609649242
H1_P_Z = 13.768452841925098
# Orientation:
H1_DX_X = -0.7522487978264571
H1_DX_Y = -0.6465952803326545
H1_DX_Z = 0.12663447247959958
H1_DY_X = 0.14828686170594452
H1_DY_Y = -0.3534102077586354
H1_DY_Z = -0.9236407481794
H1_DZ_X = 0.6419756637241427
H1_DZ_Y = -0.6760294139336906
H1_DZ_Z = 0.36173398884043984
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 44
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 17.022298570771063
H2_P_Y = 40.974182608252455
H2_P_Z = 5.363627938972833
# Orientation:
H2_DX_X = -0.5614996198052502
H2_DX_Y = -0.37112206385551616
H2_DX_Z = 0.7395854181081294
H2_DY_X = 0.21252327102732949
H2_DY_Y = 0.7991237992201903
H2_DY_Z = 0.5623477685487206
H2_DZ_X = -0.7997199736347724
H2_DZ_Y = 0.47293717049889494
H2_DZ_Z = -0.3698356344784788
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 35.63284633094664
H3_P_Y = 19.488214114580185
H3_P_Z = 29.021317269138535
# Orientation:
H3_DX_X = -0.9062485912391338
H3_DX_Y = 0.2252397092652103
H3_DX_Z = 0.3577437130785235
H3_DY_X = 0.25480672336808396
H3_DY_Y = -0.38420906011799616
H3_DY_Z = 0.8873877009794917
H3_DZ_X = 0.3373233235391666
H3_DZ_Y = 0.8953493572306677
H3_DZ_Z = 0.29079632718300275
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 29.092757254036695
H4_P_Y = 8.093727509964012
H4_P_Z = 23.99483035856446
# Orientation:
H4_DX_X = -0.7389852655679157
H4_DX_Y = 0.5011529985502001
H4_DX_Z = 0.45027374930997865
H4_DY_X = -0.2571624870656244
H4_DY_Y = 0.4079115808225531
H4_DY_Z = -0.8760568460305933
H4_DZ_X = -0.6227103921725927
H4_DZ_Y = -0.7631866182494225
H4_DZ_Z = -0.17256289637481714
#############  END of Description of junction: j1