#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS2HS5
FINGERPRINT = 73:92:92:103:163:173
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 27
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 27
S1_SQ2 = CGG
S1_SQLEN2 = 3
S1_SQ = GCGGG
S1_SQLEN = 5
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUAG
S2_SQLEN2 = 4
S2_SQ = CGUAGC
S2_SQLEN = 6
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  42
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  42
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  43
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  43
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = CAGGUCG
S3_SQLEN2 = 7
S3_SQ = CCAGGUCGG
S3_SQLEN = 9
S3_CHAR = C
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = CC
S4_SQLEN2 = 2
S4_SQ = CCCG
S4_SQLEN = 4
S4_CHAR = C
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = 73.16904631220062
H1_P_Y = 73.56481208321372
H1_P_Z = 10.889221804870004
# Orientation:
H1_DX_X = 0.49722605162587286
H1_DX_Y = 0.6844548990029011
H1_DX_Z = -0.5331864071930763
H1_DY_X = -0.577882387509959
H1_DY_Y = 0.71964944677147
H1_DY_Z = 0.38491118451832307
H1_DZ_X = 0.647161648887149
H1_DZ_Y = 0.11673116547190432
H1_DZ_Z = 0.7533628841516151
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 43
H2_OUTID2_ORIG = 27
H2_INSEQ_CHAR = C
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 60.00239605559
H2_P_Y = 75.88228187034419
H2_P_Z = 1.7204785110740524
# Orientation:
H2_DX_X = 0.6151307218407922
H2_DX_Y = -0.46894404819639135
H2_DX_Z = -0.633802551832034
H2_DY_X = -0.46376291475621656
H2_DY_Y = -0.8653158543046828
H2_DY_Z = 0.19013792674208618
H2_DZ_X = -0.6376034456811297
H2_DZ_Y = 0.1769744386913743
H2_DZ_Z = -0.7497612247278616
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = C
H3_OUTSEQ_CHAR = C
# Position:
H3_P_X = 88.20804126939284
H3_P_Y = 71.24746338488163
H3_P_Z = 24.828309077386262
# Orientation:
H3_DX_X = 0.20437982146739841
H3_DX_Y = -0.31440617524815195
H3_DX_Z = -0.9270262377855261
H3_DY_X = 0.8822695891411598
H3_DY_Y = -0.3510896238931025
H3_DY_Z = 0.31358642839144224
H3_DZ_X = -0.42406280272344077
H3_DZ_Y = -0.8819777961833495
H3_DZ_Z = 0.2056353724092972
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = C
# Position:
H4_P_X = 92.49143480820518
H4_P_Y = 82.157935970962
H4_P_Z = 23.40139133120116
# Orientation:
H4_DX_X = 0.2062175006964253
H4_DX_Y = -0.1801388450719088
H4_DX_Z = -0.9617818561933262
H4_DY_X = -0.8946759680241172
H4_DY_Y = 0.36334056563076444
H4_DY_Z = -0.2598817916038456
H4_DZ_X = 0.3962691694374314
H4_DZ_Y = 0.9140752867588446
H4_DZ_Z = -0.08623871224745372
#############  END of Description of junction: j1