#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS2
FINGERPRINT = 163
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  29
S1_NAME_ID3 = 36
S1_NUM_ID5_ORIG =  29
S1_NUM_ID3_ORIG = 36
S1_NAME2_ID5 =  31
S1_NAME2_ID3 = 34
S1_NUM2_ID5_ORIG =  31
S1_NUM2_ID3_ORIG = 34
S1_SQ2 = AGGC
S1_SQLEN2 = 4
S1_SQ = AGAGGCGA
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 9
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 9
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 7
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 7
S2_SQ2 = GG
S2_SQLEN2 = 2
S2_SQ = UCGGCU
S2_SQLEN = 6
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 31
H1_OUTID2_ORIG = 7
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -22.274841748927713
H1_P_Y = -0.5263973818191701
H1_P_Z = 1.2189690890623732
# Orientation:
H1_DX_X = -0.06681002699651373
H1_DX_Y = 0.9974642629409585
H1_DX_Z = -0.024524772137090922
H1_DY_X = 0.00810027882900144
H1_DY_Y = 0.025121108005060067
H1_DY_Z = 0.9996515970154258
H1_DZ_X = 0.9977328328643971
H1_DZ_Y = 0.06658809269117905
H1_DZ_Z = -0.00975808055578753
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 34
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -42.18537871967587
H2_P_Y = 2.306700339409689
H2_P_Z = -1.4898956001775685
# Orientation:
H2_DX_X = 0.28075553176061163
H2_DX_Y = -0.27235129327691343
H2_DX_Z = -0.9203266292117205
H2_DY_X = -0.041065233104390586
H2_DY_Y = -0.9614246052011974
H2_DY_Z = 0.27198598335907853
H2_DZ_X = -0.9589004004670656
H2_DZ_Y = -0.0385681418286552
H2_DZ_Z = -0.28110944562569906
#############  END of Description of junction: j1