#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 160
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 43
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 43
S2_NAME2_ID5 =  38
S2_NAME2_ID3 = 41
S2_NUM2_ID5_ORIG =  38
S2_NUM2_ID3_ORIG = 41
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 41
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 33.01949486361072
H1_P_Y = 1.6941240331839929
H1_P_Z = 31.66245436642687
# Orientation:
H1_DX_X = 0.34741296095896956
H1_DX_Y = -0.6661805979592366
H1_DX_Z = -0.6599300307308269
H1_DY_X = 0.9358007089360356
H1_DY_Y = 0.29122361227536886
H1_DY_Z = 0.19866011378255877
H1_DZ_X = 0.05984369400811573
H1_DZ_Y = -0.686580088959732
H1_DZ_Z = 0.7245871332914362
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 38
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 35.62139362722991
H2_P_Y = 14.919071334256461
H2_P_Z = 15.213921441614973
# Orientation:
H2_DX_X = -0.9690036386837164
H2_DX_Y = 0.20583848389199666
H2_DX_Z = -0.13661063928828732
H2_DY_X = 0.10306133410261964
H2_DY_Y = 0.8393731948382239
H2_DY_Z = 0.5336956072519836
H2_DZ_X = 0.22452240340486895
H2_DZ_Y = 0.5030737106390273
H2_DZ_Z = -0.8345696687713868
#############  END of Description of junction: j1