#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS3HS4
FINGERPRINT = 169
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  2
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  4
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  4
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = GUCAC
S1_SQLEN2 = 5
S1_SQ = GCGUCACAC
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 45
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 45
S2_NAME2_ID5 =  38
S2_NAME2_ID3 = 43
S2_NUM2_ID5_ORIG =  38
S2_NUM2_ID3_ORIG = 43
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = GUGAAGUCGC
S2_SQLEN = 10
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 10
H1_INID2 = 3
H1_OUTID2 = 8
H1_INID2_ORIG = 4
H1_OUTID2_ORIG = 43
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 31.579590263246534
H1_P_Y = 24.503005762401017
H1_P_Z = 35.334194102770965
# Orientation:
H1_DX_X = 0.02162296821789056
H1_DX_Y = 0.023741209344478875
H1_DX_Z = -0.9994842681224654
H1_DY_X = -0.7390402536932186
H1_DY_Y = 0.6736612674365894
H1_DY_Z = 1.3296117366223825E-5
H1_DZ_X = 0.673314154512223
H1_DZ_Y = 0.7386588195740913
H1_DZ_Z = 0.03211226555233537
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 38
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 13.91082991095788
H2_P_Y = 4.19293094318474
H2_P_Z = 31.190085123981124
# Orientation:
H2_DX_X = -0.07004921842521306
H2_DX_Y = -0.13108019978865926
H2_DX_Z = 0.9888938710606858
H2_DY_X = -0.8342876940032795
H2_DY_Y = 0.5511526007527845
H2_DY_Z = 0.013959022821332212
H2_DZ_X = -0.5468611804038588
H2_DZ_Y = -0.8240441686625823
H2_DZ_Z = -0.14796640652692616
#############  END of Description of junction: j1