#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS2
FINGERPRINT = 139
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = UAGG
S1_SQLEN2 = 4
S1_SQ = CUUAGGAA
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  24
S2_NAME_ID3 = 31
S2_NUM_ID5_ORIG =  24
S2_NUM_ID3_ORIG = 31
S2_NAME2_ID5 =  26
S2_NAME2_ID3 = 29
S2_NUM2_ID5_ORIG =  26
S2_NUM2_ID3_ORIG = 29
S2_SQ2 = CGAA
S2_SQLEN2 = 4
S2_SQ = GCCGAAAG
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 29
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 0.4636797308259353
H1_P_Y = -20.062649685218034
H1_P_Z = 5.350473856950252
# Orientation:
H1_DX_X = 0.8317566423089895
H1_DX_Y = 0.46373299197232143
H1_DX_Z = -0.30517634267956684
H1_DY_X = 0.29316539348254866
H1_DY_Y = 0.09990211265234805
H1_DY_Z = 0.9508278603153251
H1_DZ_X = 0.47141800987987226
H1_DZ_Y = -0.8803245310929384
H1_DZ_Z = -0.05285621928311368
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 26
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 0.009505071450633729
H2_P_Y = 9.4241170857409
H2_P_Z = -3.651202403844147
# Orientation:
H2_DX_X = 0.34824093657714905
H2_DX_Y = -0.29110198955211963
H2_DX_Z = -0.89105997652833
H2_DY_X = -0.9253576959942319
H2_DY_Y = 0.04515379486328719
H2_DY_Z = -0.3763964256919716
H2_DZ_X = 0.14980448777028532
H2_DZ_Y = 0.9556258506801925
H2_DZ_Z = -0.25364906653808283
#############  END of Description of junction: j1