#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 26:26:136:162:162:172
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  7
S1_NAME_ID3 = 12
S1_NUM_ID5_ORIG =  7
S1_NUM_ID3_ORIG = 12
S1_NAME2_ID5 =  8
S1_NAME2_ID3 = 11
S1_NUM2_ID5_ORIG =  8
S1_NUM2_ID3_ORIG = 11
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = UGAAGC
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  15
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  15
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 18
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 18
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = GCACG
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  39
S3_NAME_ID3 = 43
S3_NUM_ID5_ORIG =  39
S3_NUM_ID3_ORIG = 43
S3_NAME2_ID5 =  40
S3_NAME2_ID3 = 42
S3_NUM2_ID5_ORIG =  40
S3_NUM2_ID3_ORIG = 42
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = GCACG
S3_SQLEN = 5
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  31
S4_NAME_ID3 = 36
S4_NUM_ID5_ORIG =  31
S4_NUM_ID3_ORIG = 36
S4_NAME2_ID5 =  32
S4_NAME2_ID3 = 35
S4_NUM2_ID5_ORIG =  32
S4_NUM2_ID3_ORIG = 35
S4_SQ2 = GAAG
S4_SQLEN2 = 4
S4_SQ = UGAAGC
S4_SQLEN = 6
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 8
H1_OUTID2_ORIG = 18
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 7.377496682832721
H1_P_Y = 8.42098794643781
H1_P_Z = -10.611078956371887
# Orientation:
H1_DX_X = 0.034049799318107254
H1_DX_Y = -0.9832342268968111
H1_DX_Z = -0.17913979520203505
H1_DY_X = -0.8412942190827746
H1_DY_Y = 0.06856050930932156
H1_DY_Z = -0.5362121720934283
H1_DZ_X = 0.5395040760775593
H1_DZ_Y = 0.16896719096285118
H1_DZ_Z = -0.8248547995094793
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 40
H2_OUTID2_ORIG = 11
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -0.1373282726346674
H2_P_Y = 1.3889783558423954
H2_P_Z = 3.733963649522707
# Orientation:
H2_DX_X = -0.7565559737009955
H2_DX_Y = 0.4643065407628715
H2_DX_Z = -0.4604807214880493
H2_DY_X = 0.017610172050252837
H2_DY_Y = 0.7183860853332114
H2_DY_Z = 0.6954216808814522
H2_DZ_X = 0.6536917779027813
H2_DZ_Y = 0.5180162821808212
H2_DZ_Z = -0.5516758023494059
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 32
H3_OUTID2_ORIG = 42
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = -7.497620810200713
H3_P_Y = -8.951459106925647
H3_P_Z = 10.239658788960334
# Orientation:
H3_DX_X = -0.31526989729483823
H3_DX_Y = -0.09320569440320092
H3_DX_Z = -0.94441388722875
H3_DY_X = 0.6720080457736035
H3_DY_Y = -0.7246038855562045
H3_DY_Z = -0.15282144958216648
H3_DZ_X = -0.6700821429311814
H3_DZ_Y = -0.6828337334722612
H3_DZ_Z = 0.29108076912961245
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 16
H4_OUTID2_ORIG = 35
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 1.2307811969330134
H4_P_Y = 3.552434114171464
H4_P_Z = 1.3451045208955832
# Orientation:
H4_DX_X = 0.7035936402349985
H4_DX_Y = -0.6592344754807096
H4_DX_Z = 0.2652657078450542
H4_DY_X = 0.3194144438373516
H4_DY_Y = 0.6268609655495982
H4_DY_Z = 0.7106474111247443
H4_DZ_X = -0.6347679910714931
H4_DZ_Y = -0.41527730037638655
H4_DZ_Z = 0.6516244020163464
#############  END of Description of junction: j1