#############  Start of Description of junction: j5
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 5:9:163:164:170:171
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  6
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  6
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = UGAAGU
S1_SQLEN = 6
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = ACACA
S2_SQLEN = 5
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  14
S3_NAME_ID3 = 18
S3_NUM_ID5_ORIG =  14
S3_NUM_ID3_ORIG = 18
S3_NAME2_ID5 =  15
S3_NAME2_ID3 = 17
S3_NUM2_ID5_ORIG =  15
S3_NUM2_ID3_ORIG = 17
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = ACACA
S3_SQLEN = 5
S3_CHAR = D
## Properties of strand 4
S4_NAME_ID5 =  6
S4_NAME_ID3 = 11
S4_NUM_ID5_ORIG =  6
S4_NUM_ID3_ORIG = 11
S4_NAME2_ID5 =  7
S4_NAME2_ID3 = 10
S4_NUM2_ID5_ORIG =  7
S4_NUM2_ID3_ORIG = 10
S4_SQ2 = GAAG
S4_SQLEN2 = 4
S4_SQ = UGAAGU
S4_SQLEN = 6
S4_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = 0.7030746579483189
H1_P_Y = 16.77190495742574
H1_P_Z = 38.90379036602402
# Orientation:
H1_DX_X = -0.2782725588036697
H1_DX_Y = 0.6191073802112577
H1_DX_Z = -0.7343503488014491
H1_DY_X = 0.09369315870497541
H1_DY_Y = -0.7434058910573889
H1_DY_Z = -0.6622456290177041
H1_DZ_X = -0.9559215318365536
H1_DZ_Y = -0.25308838951860935
H1_DZ_Z = 0.14886333350470693
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 17.68951417796831
H2_P_Y = 23.23778050518064
H2_P_Z = 36.785643435290034
# Orientation:
H2_DX_X = 0.2937344365690393
H2_DX_Y = -0.9161623550872235
H2_DX_Z = -0.27270243837284625
H2_DY_X = 0.22435115811813233
H2_DY_Y = -0.21124248626330555
H2_DY_Z = 0.9513375688200014
H2_DZ_X = -0.9291860086250345
H2_DZ_Y = -0.34062171263489205
H2_DZ_Z = 0.1434928927060568
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 7
H3_OUTID2_ORIG = 17
H3_INSEQ_CHAR = D
H3_OUTSEQ_CHAR = D
# Position:
H3_P_X = 32.24396157986826
H3_P_Y = 27.78601089513637
H3_P_Z = 37.11930633482542
# Orientation:
H3_DX_X = 0.18398004546763502
H3_DX_Y = -0.3304996848686592
H3_DX_Z = -0.9257004381393799
H3_DY_X = -0.15364805166172602
H3_DY_Y = 0.9205294222660463
H3_DY_Z = -0.35919056079341516
H3_DZ_X = 0.9708468566618933
H3_DZ_Y = 0.2083159644488468
H3_DZ_Z = 0.11857841230791166
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 15
H4_OUTID2_ORIG = 10
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = D
# Position:
H4_P_X = 15.148166991142013
H4_P_Y = 22.028952438104547
H4_P_Z = 36.99767793730011
# Orientation:
H4_DX_X = -0.3199484653959317
H4_DX_Y = 0.9427501533484737
H4_DX_Z = 0.09410168889141346
H4_DY_X = 0.026543171177427993
H4_DY_Y = -0.09036430220345437
H4_DY_Z = 0.995554997451741
H4_DZ_X = 0.9470630599673058
H4_DZ_Y = 0.3210240508882656
H4_DZ_Z = 0.0038883411186958483
#############  END of Description of junction: j5