############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS2 FINGERPRINT = 157 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 27 S1_NAME_ID3 = 34 S1_NUM_ID5_ORIG = 27 S1_NUM_ID3_ORIG = 34 S1_NAME2_ID5 = 29 S1_NAME2_ID3 = 32 S1_NUM2_ID5_ORIG = 29 S1_NUM2_ID3_ORIG = 32 S1_SQ2 = AGGC S1_SQLEN2 = 4 S1_SQ = AGAGGCGU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 37 S2_NAME_ID3 = 42 S2_NUM_ID5_ORIG = 37 S2_NUM_ID3_ORIG = 42 S2_NAME2_ID5 = 39 S2_NAME2_ID3 = 40 S2_NUM2_ID5_ORIG = 39 S2_NUM2_ID3_ORIG = 40 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = ACGGCU S2_SQLEN = 6 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 29 H1_OUTID2_ORIG = 40 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 1.5785764067859196 H1_P_Y = 26.47012317963887 H1_P_Z = 47.64284639316012 # Orientation: H1_DX_X = -0.5185552795350394 H1_DX_Y = 0.004919096080133301 H1_DX_Z = -0.8550299553583471 H1_DY_X = 0.8430667348575163 H1_DY_Y = 0.16973072525719246 H1_DY_Z = -0.5103233891174881 H1_DZ_X = 0.14261452465658642 H1_DZ_Y = -0.985478200366412 H1_DZ_Z = -0.09216188995215902 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 39 H2_OUTID2_ORIG = 32 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = -7.462719124281278 H2_P_Y = 45.78625481004107 H2_P_Z = 54.9867241146364 # Orientation: H2_DX_X = -0.8913731981792923 H2_DX_Y = -0.4392915479776178 H2_DX_Z = 0.11169940663695854 H2_DY_X = 0.26312667161077474 H2_DY_Y = -0.30083397786023625 H2_DY_Z = 0.9166587546365506 H2_DZ_X = -0.369077466468303 H2_DZ_Y = 0.8464761388487076 H2_DZ_Z = 0.38374466785236905 ############# END of Description of junction: j2