############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 60:66:106:114:125:171 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UG S1_SQLEN2 = 2 S1_SQ = GAUGGG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAAUG S2_SQLEN2 = 8 S2_SQ = GUGAGUAAUGUC S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = CUAG S3_SQLEN2 = 4 S3_SQ = CCCUAGCU S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = AGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -17.187355483111293 H1_P_Y = 81.13637844943231 H1_P_Z = 10.968506473558758 # Orientation: H1_DX_X = -0.8748437059004814 H1_DX_Y = 0.04641010346038854 H1_DX_Z = -0.4821769307454602 H1_DY_X = -0.47414797869955194 H1_DY_Y = 0.12171498393401237 H1_DY_Z = 0.8719914890531193 H1_DZ_X = 0.09915737260256563 H1_DZ_Y = 0.9914794828854241 H1_DZ_Z = -0.08447633086146489 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -19.802997820855875 H2_P_Y = 61.35533384452172 H2_P_Z = 14.121918039692158 # Orientation: H2_DX_X = -0.657147625340901 H2_DX_Y = -0.6953005094611839 H2_DX_Z = -0.2910570391724452 H2_DY_X = 0.7495350690411762 H2_DY_Y = -0.6436160000632825 H2_DY_Z = -0.15477604704856773 H2_DZ_X = -0.07971310297717693 H2_DZ_Y = -0.3198681697286574 H2_DZ_Z = 0.944102841436349 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -33.291717947091705 H3_P_Y = 77.73354327891914 H3_P_Z = -5.319007329284915 # Orientation: H3_DX_X = 0.3883058723421371 H3_DX_Y = 0.08188846338779854 H3_DX_Z = 0.917884975946663 H3_DY_X = -0.17660431053371184 H3_DY_Y = 0.9841948461967007 H3_DY_Z = -0.013092830891651808 H3_DZ_X = -0.9044498145312048 H3_DZ_Y = -0.15701842020550316 H3_DZ_Z = 0.3966304939243024 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = -18.468978484975807 H4_P_Y = 82.45182968618214 H4_P_Z = -12.39004747968979 # Orientation: H4_DX_X = 0.3787129582761928 H4_DX_Y = -0.9175724213386758 H4_DX_Z = 0.12098490332427403 H4_DY_X = -0.37138965611631747 H4_DY_Y = -0.27040103045276 H4_DY_Z = -0.8882302663498365 H4_DZ_X = 0.8477300387290185 H4_DZ_Y = 0.291451770158929 H4_DZ_Z = -0.44318128018647585 ############# END of Description of junction: j4