############# Start of Description of junction: j52 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS2HS4 FINGERPRINT = 79:87:95:101:163:172 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 24 S1_NAME_ID3 = 27 S1_NUM_ID5_ORIG = 24 S1_NUM_ID3_ORIG = 27 S1_NAME2_ID5 = 25 S1_NAME2_ID3 = 26 S1_NUM2_ID5_ORIG = 25 S1_NUM2_ID3_ORIG = 26 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGC S1_SQLEN = 4 S1_CHAR = U ## Properties of strand 2 S2_NAME_ID5 = 6 S2_NAME_ID3 = 11 S2_NUM_ID5_ORIG = 6 S2_NUM_ID3_ORIG = 11 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 10 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 10 S2_SQ2 = UUAG S2_SQLEN2 = 4 S2_SQ = UUUAGC S2_SQLEN = 6 S2_CHAR = U ## Properties of strand 3 S3_NAME_ID5 = 43 S3_NAME_ID3 = 50 S3_NUM_ID5_ORIG = 43 S3_NUM_ID3_ORIG = 50 S3_NAME2_ID5 = 44 S3_NAME2_ID3 = 49 S3_NUM2_ID5_ORIG = 44 S3_NUM2_ID3_ORIG = 49 S3_SQ2 = AGGUCC S3_SQLEN2 = 6 S3_SQ = GAGGUCCU S3_SQLEN = 8 S3_CHAR = U ## Properties of strand 4 S4_NAME_ID5 = 64 S4_NAME_ID3 = 67 S4_NUM_ID5_ORIG = 64 S4_NUM_ID3_ORIG = 67 S4_NAME2_ID5 = 65 S4_NAME2_ID3 = 66 S4_NUM2_ID5_ORIG = 65 S4_NUM2_ID3_ORIG = 66 S4_SQ2 = GA S4_SQLEN2 = 2 S4_SQ = AGAA S4_SQLEN = 4 S4_CHAR = U ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 25 H1_OUTID2_ORIG = 10 H1_INSEQ_CHAR = U H1_OUTSEQ_CHAR = U # Position: H1_P_X = -52.34373473665038 H1_P_Y = 3.0454234745040383 H1_P_Z = -28.291300354265736 # Orientation: H1_DX_X = 0.7071471585662437 H1_DX_Y = 0.6150780598714403 H1_DX_Z = 0.3487432815072964 H1_DY_X = 0.005735375943245913 H1_DY_Y = -0.4981991993021615 H1_DY_Z = 0.8670436340101233 H1_DZ_X = 0.7070431398397687 H1_DZ_Y = -0.6111272683160776 H1_DZ_Z = -0.3558278520943041 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 44 H2_OUTID2_ORIG = 26 H2_INSEQ_CHAR = U H2_OUTSEQ_CHAR = U # Position: H2_P_X = -62.295227356803714 H2_P_Y = 7.571775817353812 H2_P_Z = -20.154407909173486 # Orientation: H2_DX_X = 0.5281102242046529 H2_DX_Y = 0.7856178856564604 H2_DX_Z = -0.32234163371674995 H2_DY_X = -0.6626210113788034 H2_DY_Y = 0.14385177497262447 H2_DY_Z = -0.7350102462663735 H2_DZ_X = -0.5310677794498915 H2_DZ_Y = 0.6017567652913431 H2_DZ_Z = 0.5965365110839933 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 2 H3_OUTID2 = 7 H3_INID2_ORIG = 65 H3_OUTID2_ORIG = 49 H3_INSEQ_CHAR = U H3_OUTSEQ_CHAR = U # Position: H3_P_X = -38.90370731674908 H3_P_Y = -7.362578709689533 H3_P_Z = -40.56497473578884 # Orientation: H3_DX_X = -0.17901302985468703 H3_DX_Y = 0.9542922918914565 H3_DX_Z = -0.23933356801500594 H3_DY_X = 0.5893903437793782 H3_DY_Y = -0.0907610582601226 H3_DY_Z = -0.8027337372772649 H3_DZ_X = -0.7877647858351295 H3_DZ_Y = -0.2847606924068966 H3_DZ_Z = -0.546203249951958 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 7 H4_OUTID2_ORIG = 66 H4_INSEQ_CHAR = U H4_OUTSEQ_CHAR = U # Position: H4_P_X = -28.825759293133203 H4_P_Y = -3.4115203727154073 H4_P_Z = -34.02422237321859 # Orientation: H4_DX_X = -0.3232308980073064 H4_DX_Y = 0.9280375322404879 H4_DX_Z = -0.18511651824289999 H4_DY_X = -0.4778749167432643 H4_DY_Y = 0.00877062498000969 H4_DY_Z = 0.8783841073727814 H4_DZ_X = 0.8167970069246131 H4_DZ_Y = 0.37238342456458007 H4_DZ_Z = 0.4406509214656751 ############# END of Description of junction: j52