#############  Start of Description of junction: j78
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS4HS8HS6HS9HS6
FINGERPRINT = 16:21:45:54:101:121:146:150:163:166
LOOP_LENGTH_SUM = 33
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2445
S1_NAME_ID3 = 2454
S1_NUM_ID5_ORIG =  2445
S1_NUM_ID3_ORIG = 2454
S1_NAME2_ID5 =  2446
S1_NAME2_ID3 = 2453
S1_NUM2_ID5_ORIG =  2446
S1_NUM2_ID3_ORIG = 2453
S1_SQ2 = GGAUAACA
S1_SQLEN2 = 8
S1_SQ = GGGAUAACAG
S1_SQLEN = 10
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  2053
S2_NAME_ID3 = 2065
S2_NUM_ID5_ORIG =  2053
S2_NUM_ID3_ORIG = 2065
S2_NAME2_ID5 =  2054
S2_NAME2_ID3 = 2064
S2_NUM2_ID5_ORIG =  2054
S2_NUM2_ID3_ORIG = 2064
S2_SQ2 = ACGGAAAGACC
S2_SQLEN2 = 11
S2_SQ = GACGGAAAGACCC
S2_SQLEN = 13
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  2498
S3_NAME_ID3 = 2507
S3_NUM_ID5_ORIG =  2498
S3_NUM_ID3_ORIG = 2507
S3_NAME2_ID5 =  2499
S3_NAME2_ID3 = 2506
S3_NUM2_ID5_ORIG =  2499
S3_NUM2_ID3_ORIG = 2506
S3_SQ2 = CUCGAUGU
S3_SQLEN2 = 8
S3_SQ = CCUCGAUGUC
S3_SQLEN = 10
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  2582
S4_NAME_ID3 = 2589
S4_NUM_ID5_ORIG =  2582
S4_NUM_ID3_ORIG = 2589
S4_NAME2_ID5 =  2583
S4_NAME2_ID3 = 2588
S4_NUM2_ID5_ORIG =  2583
S4_NUM2_ID3_ORIG = 2588
S4_SQ2 = GUUUAG
S4_SQLEN2 = 6
S4_SQ = GGUUUAGA
S4_SQLEN = 8
S4_CHAR = 0
## Properties of strand 5
S5_NAME_ID5 =  2605
S5_NAME_ID3 = 2616
S5_NUM_ID5_ORIG =  2605
S5_NUM_ID3_ORIG = 2616
S5_NAME2_ID5 =  2606
S5_NAME2_ID3 = 2615
S5_NUM2_ID5_ORIG =  2606
S5_NUM2_ID3_ORIG = 2615
S5_SQ2 = CGGUCCCUAU
S5_SQLEN2 = 10
S5_SQ = UCGGUCCCUAUC
S5_SQLEN = 12
S5_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 13
H1_INID2 = 2
H1_OUTID2 = 12
H1_INID2_ORIG = 2446
H1_OUTID2_ORIG = 2064
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 11.324181358019107
H1_P_Y = -25.922776118148402
H1_P_Z = -7.161760775922627
# Orientation:
H1_DX_X = -0.7878197706347834
H1_DX_Y = -0.2713121425521834
H1_DX_Z = -0.5529283229322779
H1_DY_X = 0.43753297058603735
H1_DY_Y = -0.878377908452638
H1_DY_Z = -0.19239841369545285
H1_DZ_X = -0.4334799979781234
H1_DZ_Y = -0.39349964580176433
H1_DZ_Z = 0.8107114900547376
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 2
H2_OUTID2 = 9
H2_INID2_ORIG = 2499
H2_OUTID2_ORIG = 2453
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 0.3596002083166887
H2_P_Y = -23.39158153357452
H2_P_Z = -32.96914278449603
# Orientation:
H2_DX_X = 0.7806720154863658
H2_DX_Y = 0.5186417536119841
H2_DX_Z = -0.3486573327018192
H2_DY_X = 0.3118177235912838
H2_DY_Y = -0.8067605495802503
H2_DY_Z = -0.5019034995846567
H2_DZ_X = -0.5415910925142764
H2_DZ_Y = 0.2831044808039245
H2_DZ_Z = -0.7915370752263868
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 2
H3_OUTID2 = 9
H3_INID2_ORIG = 2583
H3_OUTID2_ORIG = 2506
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 15.106461114488283
H3_P_Y = 1.0888562578531857
H3_P_Z = -20.261780385390814
# Orientation:
H3_DX_X = -0.7238899493106281
H3_DX_Y = -0.5383118070379311
H3_DX_Z = -0.43151331345696775
H3_DY_X = -0.6590991306765197
H3_DY_Y = 0.7244341585947784
H3_DY_Z = 0.20194921589977
H3_DZ_X = 0.20389133681574556
H3_DZ_Y = 0.43059905743583915
H3_DZ_Z = -0.879211450395669
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 2606
H4_OUTID2_ORIG = 2588
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = -0.6851572329856257
H4_P_Y = -6.80806369531379
H4_P_Z = -1.296926429787213
# Orientation:
H4_DX_X = 0.3392369825852901
H4_DX_Y = 0.537930310858119
H4_DX_Z = 0.7717183749960315
H4_DY_X = -0.6161160014225404
H4_DY_Y = 0.7469783284743023
H4_DY_Z = -0.24984885347113006
H4_DZ_X = -0.7108581732227097
H4_DZ_Y = -0.39071006827291477
H4_DZ_Z = 0.5848301463781138
## Properties of helix 5
H5_INID = 1
H5_OUTID = 12
H5_INID2 = 2
H5_OUTID2 = 11
H5_INID2_ORIG = 2054
H5_OUTID2_ORIG = 2615
H5_INSEQ_CHAR = 0
H5_OUTSEQ_CHAR = 0
# Position:
H5_P_X = 32.83908078375661
H5_P_Y = -3.9448993488243262
H5_P_Z = -30.851877720496738
# Orientation:
H5_DX_X = 0.6286551241713809
H5_DX_Y = -0.6872090839434932
H5_DX_Z = -0.3640555037334501
H5_DY_X = -0.7235333784872395
H5_DY_Y = -0.3452097844517308
H5_DY_Z = -0.5977705704813765
H5_DZ_X = 0.2851178441765967
H5_DZ_Y = 0.6391978407851004
H5_DZ_Z = -0.7142366101424322
#############  END of Description of junction: j78