############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 4HS1 FINGERPRINT = 34:72:125:129:159:161 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 177 S1_NAME_ID3 = 180 S1_NUM_ID5_ORIG = 177 S1_NUM_ID3_ORIG = 180 S1_NAME2_ID5 = 178 S1_NAME2_ID3 = 179 S1_NUM2_ID5_ORIG = 178 S1_NUM2_ID3_ORIG = 179 S1_SQ2 = CA S1_SQLEN2 = 2 S1_SQ = GCAU S1_SQLEN = 4 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 142 S2_NAME_ID3 = 145 S2_NUM_ID5_ORIG = 142 S2_NUM_ID3_ORIG = 145 S2_NAME2_ID5 = 143 S2_NAME2_ID3 = 144 S2_NUM2_ID5_ORIG = 143 S2_NUM2_ID3_ORIG = 144 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = GAGG S2_SQLEN = 4 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 195 S3_NAME_ID3 = 199 S3_NUM_ID5_ORIG = 195 S3_NUM_ID3_ORIG = 199 S3_NAME2_ID5 = 196 S3_NAME2_ID3 = 198 S3_NUM2_ID5_ORIG = 196 S3_NUM2_ID3_ORIG = 198 S3_SQ2 = AAG S3_SQLEN2 = 3 S3_SQ = AAAGA S3_SQLEN = 5 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 218 S4_NAME_ID3 = 221 S4_NUM_ID5_ORIG = 218 S4_NUM_ID3_ORIG = 221 S4_NAME2_ID5 = 219 S4_NAME2_ID3 = 220 S4_NUM2_ID5_ORIG = 219 S4_NUM2_ID3_ORIG = 220 S4_SQ2 = UG S4_SQLEN2 = 2 S4_SQ = UUGC S4_SQLEN = 4 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 178 H1_OUTID2_ORIG = 144 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 12.21592847214996 H1_P_Y = 110.7515094897431 H1_P_Z = -16.70394051110153 # Orientation: H1_DX_X = 0.5127154211196707 H1_DX_Y = 0.8583568713134611 H1_DX_Z = 0.018611244317423115 H1_DY_X = 0.8550794915835791 H1_DY_Y = -0.512467292606317 H1_DY_Z = 0.07884375106453945 H1_DZ_X = 0.07721372947376359 H1_DZ_Y = -0.024510313701028963 H1_DZ_Z = -0.9967132408586892 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 196 H2_OUTID2_ORIG = 179 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 17.420506731889844 H2_P_Y = 110.47645006707202 H2_P_Z = -0.7152455855841815 # Orientation: H2_DX_X = -0.20057475702396133 H2_DX_Y = 0.9118057600085194 H2_DX_Z = -0.35830158087855035 H2_DY_X = -0.9626275536549471 H2_DY_Y = -0.25136788099878515 H2_DY_Z = -0.10080863726125955 H2_DZ_X = -0.18198340525738033 H2_DZ_Y = 0.3246913063472192 H2_DZ_Z = 0.9281473998204492 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 5 H3_INID2 = 2 H3_OUTID2 = 4 H3_INID2_ORIG = 219 H3_OUTID2_ORIG = 198 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -0.8235029619909149 H3_P_Y = 123.22314878779773 H3_P_Z = -20.693854628397865 # Orientation: H3_DX_X = 0.1337174295304091 H3_DX_Y = -0.8459256608960715 H3_DX_Z = -0.5162648789887925 H3_DY_X = -0.9801501073062098 H3_DY_Y = -0.03594450880602551 H3_DY_Z = -0.1949711759063817 H3_DZ_X = 0.14637423334523048 H3_DZ_Y = 0.5320881210140129 H3_DZ_Z = -0.8339405346236433 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 143 H4_OUTID2_ORIG = 220 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = -3.546867345502216 H4_P_Y = 115.39842505608969 H4_P_Z = -7.049596429517679 # Orientation: H4_DX_X = 0.34069381154839107 H4_DX_Y = -0.6030224347877606 H4_DX_Z = -0.7213124634409622 H4_DY_X = 0.9241896480866321 H4_DY_Y = 0.07393216321007401 H4_DY_Z = 0.374709927293881 H4_DZ_X = -0.1726303019233164 H4_DZ_Y = -0.7942908651027807 H4_DZ_Z = 0.582495322274907 ############# END of Description of junction: j3