#############  Start of Description of junction: j2
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS32HS4
FINGERPRINT = 18:35:126:142:161:173
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  176
S1_NAME_ID3 = 185
S1_NUM_ID5_ORIG =  176
S1_NUM_ID3_ORIG = 185
S1_NAME2_ID5 =  178
S1_NAME2_ID3 = 183
S1_NUM2_ID5_ORIG =  178
S1_NUM2_ID3_ORIG = 183
S1_SQ2 = CAUAAC
S1_SQLEN2 = 6
S1_SQ = CGCAUAACGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  141
S2_NAME_ID3 = 146
S2_NUM_ID5_ORIG =  141
S2_NUM_ID3_ORIG = 146
S2_NAME2_ID5 =  143
S2_NAME2_ID3 = 144
S2_NUM2_ID5_ORIG =  143
S2_NUM2_ID3_ORIG = 144
S2_SQ2 = AG
S2_SQLEN2 = 2
S2_SQ = GGAGGG
S2_SQLEN = 6
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  192
S3_NAME_ID3 = 200
S3_NUM_ID5_ORIG =  192
S3_NUM_ID3_ORIG = 200
S3_NAME2_ID5 =  194
S3_NAME2_ID3 = 198
S3_NUM2_ID5_ORIG =  194
S3_NUM2_ID3_ORIG = 198
S3_SQ2 = CAAAG
S3_SQLEN2 = 5
S3_SQ = ACCAAAGAG
S3_SQLEN = 9
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  217
S4_NAME_ID3 = 222
S4_NUM_ID5_ORIG =  217
S4_NUM_ID3_ORIG = 222
S4_NAME2_ID5 =  219
S4_NAME2_ID3 = 220
S4_NUM2_ID5_ORIG =  219
S4_NUM2_ID3_ORIG = 220
S4_SQ2 = UG
S4_SQLEN2 = 2
S4_SQ = CUUGCC
S4_SQLEN = 6
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 178
H1_OUTID2_ORIG = 144
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 12.492433910086326
H1_P_Y = 111.02129433131677
H1_P_Z = -19.43318253938675
# Orientation:
H1_DX_X = 0.8999081321870577
H1_DX_Y = 0.43432508712241713
H1_DX_Z = 0.03907777270660162
H1_DY_X = 0.43245776108652123
H1_DY_Y = -0.9003690019799535
H1_DY_Z = 0.048124267783002495
H1_DZ_X = 0.05608599200899711
H1_DZ_Y = -0.026407933840530973
H1_DZ_Z = -0.9980766416115756
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 194
H2_OUTID2_ORIG = 183
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 11.036861008069826
H2_P_Y = 111.16693296298598
H2_P_Z = 12.520750289289499
# Orientation:
H2_DX_X = -0.27736634433201957
H2_DX_Y = -0.7407750631185479
H2_DX_Z = -0.6118171433472526
H2_DY_X = 0.9202808146528927
H2_DY_Y = -0.38775094117211495
H2_DY_Z = 0.05227264869845172
H2_DZ_X = -0.2759549477971035
H2_DZ_Y = -0.5485449056201759
H2_DZ_Z = 0.7892701396254953
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 3
H3_OUTID2 = 7
H3_INID2_ORIG = 219
H3_OUTID2_ORIG = 198
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = -0.3043341271913942
H3_P_Y = 124.95017357624579
H3_P_Z = -23.047793766025816
# Orientation:
H3_DX_X = -0.3990404030318735
H3_DX_Y = -0.7342338485065198
H3_DX_Z = -0.5492425807013319
H3_DY_X = -0.9026601739969853
H3_DY_Y = 0.4198351070800044
H3_DY_Z = 0.09456792872242303
H3_DZ_X = 0.16115634343048363
H3_DZ_Y = 0.5335158278537051
H3_DZ_Z = -0.830294823783511
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 143
H4_OUTID2_ORIG = 220
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = -3.955324844375909
H4_P_Y = 113.4665865270102
H4_P_Z = -5.761567063017299
# Orientation:
H4_DX_X = 0.784698550930846
H4_DX_Y = -0.48204093016686045
H4_DX_Z = -0.3897239097244203
H4_DY_X = 0.5926723393283919
H4_DY_Y = 0.3992177724028778
H4_DY_Z = 0.6995460445122195
H4_DZ_X = -0.1816251148989041
H4_DZ_Y = -0.7799113487067189
H4_DZ_Z = 0.5989579332444119
#############  END of Description of junction: j2