############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS2HS4 FINGERPRINT = 76:87:95:103:160:172 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 24 S1_NAME_ID3 = 27 S1_NUM_ID5_ORIG = 24 S1_NUM_ID3_ORIG = 27 S1_NAME2_ID5 = 25 S1_NAME2_ID3 = 26 S1_NUM2_ID5_ORIG = 25 S1_NUM2_ID3_ORIG = 26 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGC S1_SQLEN = 4 S1_CHAR = U ## Properties of strand 2 S2_NAME_ID5 = 6 S2_NAME_ID3 = 11 S2_NUM_ID5_ORIG = 6 S2_NUM_ID3_ORIG = 11 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 10 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 10 S2_SQ2 = UUAG S2_SQLEN2 = 4 S2_SQ = UUUAGC S2_SQLEN = 6 S2_CHAR = U ## Properties of strand 3 S3_NAME_ID5 = 43 S3_NAME_ID3 = 50 S3_NUM_ID5_ORIG = 43 S3_NUM_ID3_ORIG = 50 S3_NAME2_ID5 = 44 S3_NAME2_ID3 = 49 S3_NUM2_ID5_ORIG = 44 S3_NUM2_ID3_ORIG = 49 S3_SQ2 = AGGUCC S3_SQLEN2 = 6 S3_SQ = GAGGUCCU S3_SQLEN = 8 S3_CHAR = U ## Properties of strand 4 S4_NAME_ID5 = 64 S4_NAME_ID3 = 67 S4_NUM_ID5_ORIG = 64 S4_NUM_ID3_ORIG = 67 S4_NAME2_ID5 = 65 S4_NAME2_ID3 = 66 S4_NUM2_ID5_ORIG = 65 S4_NUM2_ID3_ORIG = 66 S4_SQ2 = GA S4_SQLEN2 = 2 S4_SQ = AGAA S4_SQLEN = 4 S4_CHAR = U ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 25 H1_OUTID2_ORIG = 10 H1_INSEQ_CHAR = U H1_OUTSEQ_CHAR = U # Position: H1_P_X = -51.83778403198978 H1_P_Y = 3.7442416890609076 H1_P_Z = -23.396013645336193 # Orientation: H1_DX_X = 0.6553394294650445 H1_DX_Y = 0.7009563336419693 H1_DX_Z = 0.2814079787704067 H1_DY_X = 0.05995536037008975 H1_DY_Y = -0.41965846825888686 H1_DY_Z = 0.9056997983777499 H1_DZ_X = 0.752951251377759 H1_DZ_Y = -0.5766688723572768 H1_DZ_Z = -0.317044830746152 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 44 H2_OUTID2_ORIG = 26 H2_INSEQ_CHAR = U H2_OUTSEQ_CHAR = U # Position: H2_P_X = -62.061978936735294 H2_P_Y = 8.148124250526918 H2_P_Z = -14.855285109065038 # Orientation: H2_DX_X = 0.43301345849874195 H2_DX_Y = 0.804234428706943 H2_DX_Z = -0.40707042196821064 H2_DY_X = -0.720607241774772 H2_DY_Y = 0.037560510203453745 H2_DY_Z = -0.6923253651102304 H2_DZ_X = -0.5415021217508951 H2_DZ_Y = 0.5931240947353871 H2_DZ_Z = 0.5958013598369938 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 2 H3_OUTID2 = 7 H3_INID2_ORIG = 65 H3_OUTID2_ORIG = 49 H3_INSEQ_CHAR = U H3_OUTSEQ_CHAR = U # Position: H3_P_X = -38.60798605117538 H3_P_Y = -6.097864372078503 H3_P_Z = -35.91675682124683 # Orientation: H3_DX_X = -0.260999141012519 H3_DX_Y = 0.9174140676499096 H3_DX_Z = -0.300384548318938 H3_DY_X = 0.5571829934722388 H3_DY_Y = -0.11093784644304794 H3_DY_Z = -0.8229458706451425 H3_DZ_X = -0.7883061335395283 H3_DZ_Y = -0.3821573271633394 H3_DZ_Z = -0.4822128338393057 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 7 H4_OUTID2_ORIG = 66 H4_INSEQ_CHAR = U H4_OUTSEQ_CHAR = U # Position: H4_P_X = -28.575193483064027 H4_P_Y = -0.9439124689665241 H4_P_Z = -30.276620718595737 # Orientation: H4_DX_X = -0.3922828708380912 H4_DX_Y = 0.8878289205667913 H4_DX_Z = -0.24057006682510007 H4_DY_X = -0.42867832168755626 H4_DY_Y = 0.05494225491271587 H4_DY_Z = 0.9017850326659058 H4_DZ_X = 0.8138482940709331 H4_DZ_Y = 0.45688199398784857 H4_DZ_Z = 0.35904010612676984 ############# END of Description of junction: j53