#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS8HS7
FINGERPRINT = 36:57:72:76:105:107:111:119:121:176
LOOP_LENGTH_SUM = 17
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  101
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  101
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  103
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  103
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = UGGCGGACGG
S1_SQLEN2 = 10
S1_SQ = AGUGGCGGACGGGU
S1_SQLEN = 14
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 68
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 68
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 66
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 66
S2_SQ2 = CAAGUCGAA
S2_SQLEN2 = 9
S2_SQ = UGCAAGUCGAACG
S2_SQLEN = 13
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AC
S3_SQLEN2 = 2
S3_SQ = ACACUG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = GA
S4_SQLEN2 = 2
S4_SQ = CAGACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 13
H1_INID2 = 3
H1_OUTID2 = 11
H1_INID2_ORIG = 103
H1_OUTID2_ORIG = 66
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -5.282266188802496
H1_P_Y = 104.8121117341676
H1_P_Z = -40.124826643575666
# Orientation:
H1_DX_X = 0.9974353088245502
H1_DX_Y = 0.03328757479036426
H1_DX_Z = -0.06336199235063589
H1_DY_X = 0.003803444187550298
H1_DY_Y = -0.9086685846534124
H1_DY_Z = -0.417500822845021
H1_DZ_X = -0.07147264177556512
H1_DZ_Y = 0.41618906836741587
H1_DZ_Z = -0.9064647377858037
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -24.384590536890393
H2_P_Y = 80.2982092441489
H2_P_Z = -9.297379629815456
# Orientation:
H2_DX_X = -0.1955399029896192
H2_DX_Y = -0.6775720028328323
H2_DX_Z = -0.7089854210884088
H2_DY_X = 0.5116601846100153
H2_DY_Y = -0.6872342592836276
H2_DY_Z = 0.5156674590777737
H2_DZ_X = -0.8366409037476323
H2_DZ_Y = -0.2619260465169333
H2_DZ_Z = 0.4810683364474855
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = -5.543981068354416
H3_P_Y = 72.79486711636451
H3_P_Z = -18.62059575874381
# Orientation:
H3_DX_X = -0.3106305211683882
H3_DX_Y = -0.7982145030144352
H3_DX_Z = 0.5161029805146171
H3_DY_X = 0.9478136246557209
H3_DY_Y = -0.2190837064285489
H3_DY_Z = 0.23162828517804712
H3_DZ_X = -0.07181930266751912
H3_DZ_Y = 0.5611202515993767
H3_DZ_Z = 0.8246126672622793
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = -4.286493310816292
H4_P_Y = 63.55703404299201
H4_P_Z = -34.278703885030374
# Orientation:
H4_DX_X = -0.9847832617450765
H4_DX_Y = -0.1731621189685839
H4_DX_Z = -0.014724399513788455
H4_DY_X = -0.13977307955175444
H4_DY_Y = 0.8395406551423932
H4_DY_Z = -0.5250094995290127
H4_DZ_X = 0.10327348943145154
H4_DZ_Y = -0.514962492728742
H4_DZ_Z = -0.8509689873686668
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = -24.712658579520507
H5_P_Y = 71.39101394289871
H5_P_Z = -30.01308741445597
# Orientation:
H5_DX_X = -0.6777102855580175
H5_DX_Y = 0.7352797971273617
H5_DX_Z = 0.008508159918807934
H5_DY_X = -0.03004403490232832
H5_DY_Y = -0.016127111578484232
H5_DY_Z = -0.9994184670291624
H5_DZ_X = -0.734714995638214
H5_DZ_Y = -0.6775717941358437
H5_DZ_Z = 0.03302028128095458
#############  END of Description of junction: j1