############# Start of Description of junction: j31 # Number of strands: NUM_STRANDS = 2 LILLEY = HS5HS6 FINGERPRINT = 168 LOOP_LENGTH_SUM = 11 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2647 S1_NAME_ID3 = 2658 S1_NUM_ID5_ORIG = 2647 S1_NUM_ID3_ORIG = 2658 S1_NAME2_ID5 = 2649 S1_NAME2_ID3 = 2656 S1_NUM2_ID5_ORIG = 2649 S1_NUM2_ID3_ORIG = 2656 S1_SQ2 = CUCCUAGU S1_SQLEN2 = 8 S1_SQ = UGCUCCUAGUAC S1_SQLEN = 12 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2663 S2_NAME_ID3 = 2673 S2_NUM_ID5_ORIG = 2663 S2_NUM_ID3_ORIG = 2673 S2_NAME2_ID5 = 2665 S2_NAME2_ID3 = 2671 S2_NUM2_ID5_ORIG = 2665 S2_NUM2_ID3_ORIG = 2671 S2_SQ2 = ACCGGAG S2_SQLEN2 = 7 S2_SQ = GGACCGGAGUG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 2649 H1_OUTID2_ORIG = 2671 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 10.681972175483065 H1_P_Y = 29.20280115230046 H1_P_Z = -54.398283174469704 # Orientation: H1_DX_X = -0.2377409896253937 H1_DX_Y = 0.7007303882934046 H1_DX_Z = 0.6726486042311492 H1_DY_X = -0.4826929660631283 H1_DY_Y = -0.6861740682451085 H1_DY_Z = 0.5442174644212869 H1_DZ_X = 0.8429037444246621 H1_DZ_Y = -0.19529995133161648 H1_DZ_Z = 0.5013693315757877 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 3 H2_OUTID2 = 10 H2_INID2_ORIG = 2665 H2_OUTID2_ORIG = 2656 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = -25.293992363323287 H2_P_Y = 38.069651615007686 H2_P_Z = -59.79018581576517 # Orientation: H2_DX_X = 0.2971772181075423 H2_DX_Y = -0.6258852543036113 H2_DX_Z = -0.7210779080537435 H2_DY_X = -0.27379414120871104 H2_DY_Y = -0.7793405497605264 H2_DY_Z = 0.5636178454757754 H2_DZ_X = -0.9147253518284302 H2_DZ_Y = 0.02993252318589157 H2_DZ_Z = -0.4029659722334884 ############# END of Description of junction: j31