############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 130 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 191.39906616715896 H1_P_Y = 134.08613356805722 H1_P_Z = 65.23332863441411 # Orientation: H1_DX_X = -0.4272394230114003 H1_DX_Y = 0.7545168837488916 H1_DX_Z = -0.4981673891000469 H1_DY_X = -0.8731587138646262 H1_DY_Y = -0.20132471959726672 H1_DY_Z = 0.4439169040275033 H1_DZ_X = 0.2346493891471937 H1_DZ_Y = 0.624637998697608 H1_DZ_Z = 0.7448268488419956 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 183.890493842895 H2_P_Y = 135.66510710740704 H2_P_Z = 43.24785761541038 # Orientation: H2_DX_X = 0.9882880077927325 H2_DX_Y = -0.15163903265730028 H2_DX_Z = -0.0171002171860124 H2_DY_X = -0.1525177071110022 H2_DY_Y = -0.9778490261680872 H2_DY_Z = -0.1433514249657648 H2_DZ_X = 0.005016240689258211 H2_DZ_Y = 0.14428058010997802 H2_DZ_Z = -0.9895241035631628 ############# END of Description of junction: j9